| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_3859 |
|---|
| Symbol | |
|---|
| ID | 3678499 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | - |
|---|
| Start bp | 4806570 |
|---|
| End bp | 4808495 |
|---|
| Gene Length | 1926 bp |
|---|
| Protein Length | 641 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637719211 |
|---|
| Product | Cd/Co/Hg/Pb/Zn-translocating P-type ATPase |
|---|
| Protein accession | YP_324359 |
|---|
| Protein GI | 75910063 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2217] Cation transport ATPase |
|---|
| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01512] heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.90046 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTTACC CCCAACGTAT CCACCAATTC ACCAAAGAAC ACACCGACAC CTTAGCTGCT
TTGCTTTGTG GAGTGCTGTT ATTTTTCGGA TGGTTCGCTT TGCATTTGGG TTGGTTGGGT
TTCGCGTTGT TGTTCTTACC TGCGGCTTAT GTGATTGGTG GTTATGAAAG CGCCCGTGAG
GGACTAACGA CGCTAATCAA GGAAAAAGAA CTAGATGTCG ATTTGCTGAT GATTGTCGCC
GCCCTTGGTG CAGCAAGTTT GGGCTTGTGG CGGAGAGAAT ATCATCTAAT TATTGATGGG
GCAATTTTGA TTCTCATCTT TGCTATCAGT GGTGCATTGG AAGGTTACGC CATGCGCCAC
ACTGAGAGGA GTATCCGCAG TTTGATGAGC TTGACACCAG ATACAGCCAC GATTGTCAAT
CAAGCTGGGG AAGAAACTAT TGCTATCAGT CAATTGCAAG TAGGGGATGA GATTGTTGTT
AAGCCGGGTG AGTTGATTCC TACTGATGCT GTGATTGTGT CTGGTTACAG CACCATCAAT
CAAGCGGCGA TTACGGGGGA GTCTTTACCC GTAGAAAAGA CGGTAGGCGA GGAAGTTTTT
GCTGGGACAC TGAATGGTTA TGGGGCGTTG AAATTAAGGG TACACAAACC AGCCGCCAGT
AGTTTAATTC AACGGGTAAT TCGTCTGGTG GAACAAGCAC AAACACAAGC GCCTCCCTCC
CAACAGTTTA TCGAAGTGTT TGAGAGGGGA TATGCAAAGG TAATTGTGAT TGCGGGGATA
TTATTGGCAA CTTTACCGCC ATTTATTTGG GGTTGGGACT GGGAAACAAC AATTTATCGC
GCCTTAACTT TTTTGGTTGT GGCTTCTCCC TGTGCGCTGA TGGCGGCAAT TATGCCTACA
TTATTATCGG GTATTGCCAA TGGCGCAAGA CAGGGGATTT TGTTTAAAAA TGGGGCGCAG
TTGGAGAATA TTGGTAAAGT CAGAGCGATC GCCTTTGATA AAACTGGTAC TCTCACTACA
GGACAAGTGC AGGTATCTCA GGTGATTGCT GCTAGTAATT ACACAGAGAC AAGTGTTTTA
AAAGTAGCGG CATCCCTAGA GTCATCCTCA GAACATCCCA TTGCTCAAGC CATTGTCCAA
GCAGCTAGCG GTTTAGAGTG GGTACGTGCA ACGGAGGTAC AAGCGATACC AGGGCAAGGA
ATTGTGGGTA CTGCTCATGA GCAACAAGTA ATTGTGGGGA ATATAGCTTT TGTCCAGAAG
TATGTAGACA AGTTACCACA GGAATTACTG GAGGTCGCGC CATCTTTGGA AGATGAGGGG
AAAACGGTGG TTTGGATAGC CCAAGGGGAA AGTCATGGGG ATGAGTATCA GGTAATGGGT
ATAATTGCCA TTGCAGATAT GATTAGACCA GAAGCGGCTG CGACTATTGC TAGGTTGCGG
AAATTGGGTA TAGAACAAAT TGTGATGATT ACGGGAGATA ATCAACGCAC GGCTGAGAGT
GTAGCTCAAG CGGTGGGGAT TGATCAAGTA TTTGCCGAAC TTTTACCTGA AGATAAATTA
GATGTCATTC GCAGTTTGCA GCAAAAGTAT CAAACAGTGG CGATGGTGGG GGATGGGATT
AATGATGCAC CAGCTTTGGC TCAAGCATCT GTAGGGATTG CAATGGGTGT GGCTGGGAGT
GATGTGGCTT TGGAAACGGC AGATATTGTA TTGATGGCTG ATAAATTAGA GAAGATTGAT
GTAGCTATGA AATTGGGTAG GCGATCGCAT AGCATTATCC AGCAAAATAT AGTTGTAGCT
CTGGGTTTTA TTGGTCTATT GTTAATTGGT AATTTTCTCG GCAATATTAA CTTACCCATC
GGCGTTATTG GCCATGAAGG TTCCACTGTG TTAGTTACCC TGAGTGGTTT ACGATTACTG
AAGTAA
|
|---|
| Protein sequence | MLYPQRIHQF TKEHTDTLAA LLCGVLLFFG WFALHLGWLG FALLFLPAAY VIGGYESARE
GLTTLIKEKE LDVDLLMIVA ALGAASLGLW RREYHLIIDG AILILIFAIS GALEGYAMRH
TERSIRSLMS LTPDTATIVN QAGEETIAIS QLQVGDEIVV KPGELIPTDA VIVSGYSTIN
QAAITGESLP VEKTVGEEVF AGTLNGYGAL KLRVHKPAAS SLIQRVIRLV EQAQTQAPPS
QQFIEVFERG YAKVIVIAGI LLATLPPFIW GWDWETTIYR ALTFLVVASP CALMAAIMPT
LLSGIANGAR QGILFKNGAQ LENIGKVRAI AFDKTGTLTT GQVQVSQVIA ASNYTETSVL
KVAASLESSS EHPIAQAIVQ AASGLEWVRA TEVQAIPGQG IVGTAHEQQV IVGNIAFVQK
YVDKLPQELL EVAPSLEDEG KTVVWIAQGE SHGDEYQVMG IIAIADMIRP EAAATIARLR
KLGIEQIVMI TGDNQRTAES VAQAVGIDQV FAELLPEDKL DVIRSLQQKY QTVAMVGDGI
NDAPALAQAS VGIAMGVAGS DVALETADIV LMADKLEKID VAMKLGRRSH SIIQQNIVVA
LGFIGLLLIG NFLGNINLPI GVIGHEGSTV LVTLSGLRLL K
|
|---|
| |