Gene Ava_3850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3850 
Symbol 
ID3678743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4792438 
End bp4793553 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content42% 
IMG OID637719202 
Productperiplasmic sensor Signal transduction histidine kinase 
Protein accessionYP_324350 
Protein GI75910054 
COG category[T] Signal transduction mechanisms 
COG ID[COG2205] Osmosensitive K+ channel histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAGCCC GGCGAACTAA ATTACTATCC CAAAACTCAT TTTTGGTAAA AGCCTCAGTC 
ATCTTAGGGC TATTGATCAC AGTGATTTCT ATGGAGTTTT CTACGCCCAC AGAATATGTA
TTTGGGTATC TTTATACTGG GCCAATTCTG TTAGCTAATC ACTGGTTTGG ACGTATAGCA
ACTTTATTGA CGACATTTAT TGCTGTATTT TTAACGATTG TGAATCTTTG GCTTCCAGAT
CATGAAGTGA TTAGGTTTCC TACAGTCGCT AGTCGGACGA TCGCCTGTAT GTCCTTGATT
GTAACAGGAA TTTTAAGCGA TCGCCTGCGT CATTCTCAAG AGGCGATCGC CCTCACCCGT
GCCAAATTAG AATCACAGGA AGAATTAGTC AGACTGCGGG AAGATTTTGC TTCTACTCTC
ACCCACGATT TGAAAACACC ACTTTTGGGT GCTATTGAAA CTCTCAAAGC TGTTCAACAA
GAAAAATTTG GTGCGGTATC ATCAGCACAG CAGCCGGTGT TAGCCACAAT TATCCGCAGC
CATCAAACTT CTCTACAACT CCTAGAAACT TTATTAGATA TCTATCGCAA TGATACAGAA
GGTTTACAGC TAAATTTAAT TCCTGTGGAT TTAACCACCT TGGCCGAGGA AGCAGCGAGT
ACACTAATTG ATTTGGCTGC CAGTCGGCGA GTTCATATAT CGTTTAATTA TGGTGACTCT
GATTGGCGGC GATCGCTGTG GGTAAACGGT GACCCTCTGC AATTGCAACG GGTGTTGTAT
AATCTCCTAG TCAATGCTAT CAATCATTCT CGGCGGGGCG ATCGTGTAGA GGTTATATTA
GAAACCCAAG CTTCCTATCA AGTAGTAAAA ATTTCCGATA CTGGCCCAGG TATTCAAGCA
GAACAGTTTC CCCATTTATT TGAACGATTT TATCAAGGAC ATAGTGAACG CCAAGCCAAA
GGTTCAGGTT TAGGACTTTA TTTATCTCGA CAAATTATTG CAGCTCATAA CGGTATAATT
TGGGCAGAGA ATAGAGTTCC TACGGGTGCT ATGTTTGCAT TCAAATTGCC TGTTCTCCCA
TTTCAGCCCT CCTTATCTGC GTCAGATGGC TTCTAA
 
Protein sequence
MLARRTKLLS QNSFLVKASV ILGLLITVIS MEFSTPTEYV FGYLYTGPIL LANHWFGRIA 
TLLTTFIAVF LTIVNLWLPD HEVIRFPTVA SRTIACMSLI VTGILSDRLR HSQEAIALTR
AKLESQEELV RLREDFASTL THDLKTPLLG AIETLKAVQQ EKFGAVSSAQ QPVLATIIRS
HQTSLQLLET LLDIYRNDTE GLQLNLIPVD LTTLAEEAAS TLIDLAASRR VHISFNYGDS
DWRRSLWVNG DPLQLQRVLY NLLVNAINHS RRGDRVEVIL ETQASYQVVK ISDTGPGIQA
EQFPHLFERF YQGHSERQAK GSGLGLYLSR QIIAAHNGII WAENRVPTGA MFAFKLPVLP
FQPSLSASDG F