Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3850 |
Symbol | |
ID | 3678743 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 4792438 |
End bp | 4793553 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637719202 |
Product | periplasmic sensor Signal transduction histidine kinase |
Protein accession | YP_324350 |
Protein GI | 75910054 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTAGCCC GGCGAACTAA ATTACTATCC CAAAACTCAT TTTTGGTAAA AGCCTCAGTC ATCTTAGGGC TATTGATCAC AGTGATTTCT ATGGAGTTTT CTACGCCCAC AGAATATGTA TTTGGGTATC TTTATACTGG GCCAATTCTG TTAGCTAATC ACTGGTTTGG ACGTATAGCA ACTTTATTGA CGACATTTAT TGCTGTATTT TTAACGATTG TGAATCTTTG GCTTCCAGAT CATGAAGTGA TTAGGTTTCC TACAGTCGCT AGTCGGACGA TCGCCTGTAT GTCCTTGATT GTAACAGGAA TTTTAAGCGA TCGCCTGCGT CATTCTCAAG AGGCGATCGC CCTCACCCGT GCCAAATTAG AATCACAGGA AGAATTAGTC AGACTGCGGG AAGATTTTGC TTCTACTCTC ACCCACGATT TGAAAACACC ACTTTTGGGT GCTATTGAAA CTCTCAAAGC TGTTCAACAA GAAAAATTTG GTGCGGTATC ATCAGCACAG CAGCCGGTGT TAGCCACAAT TATCCGCAGC CATCAAACTT CTCTACAACT CCTAGAAACT TTATTAGATA TCTATCGCAA TGATACAGAA GGTTTACAGC TAAATTTAAT TCCTGTGGAT TTAACCACCT TGGCCGAGGA AGCAGCGAGT ACACTAATTG ATTTGGCTGC CAGTCGGCGA GTTCATATAT CGTTTAATTA TGGTGACTCT GATTGGCGGC GATCGCTGTG GGTAAACGGT GACCCTCTGC AATTGCAACG GGTGTTGTAT AATCTCCTAG TCAATGCTAT CAATCATTCT CGGCGGGGCG ATCGTGTAGA GGTTATATTA GAAACCCAAG CTTCCTATCA AGTAGTAAAA ATTTCCGATA CTGGCCCAGG TATTCAAGCA GAACAGTTTC CCCATTTATT TGAACGATTT TATCAAGGAC ATAGTGAACG CCAAGCCAAA GGTTCAGGTT TAGGACTTTA TTTATCTCGA CAAATTATTG CAGCTCATAA CGGTATAATT TGGGCAGAGA ATAGAGTTCC TACGGGTGCT ATGTTTGCAT TCAAATTGCC TGTTCTCCCA TTTCAGCCCT CCTTATCTGC GTCAGATGGC TTCTAA
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Protein sequence | MLARRTKLLS QNSFLVKASV ILGLLITVIS MEFSTPTEYV FGYLYTGPIL LANHWFGRIA TLLTTFIAVF LTIVNLWLPD HEVIRFPTVA SRTIACMSLI VTGILSDRLR HSQEAIALTR AKLESQEELV RLREDFASTL THDLKTPLLG AIETLKAVQQ EKFGAVSSAQ QPVLATIIRS HQTSLQLLET LLDIYRNDTE GLQLNLIPVD LTTLAEEAAS TLIDLAASRR VHISFNYGDS DWRRSLWVNG DPLQLQRVLY NLLVNAINHS RRGDRVEVIL ETQASYQVVK ISDTGPGIQA EQFPHLFERF YQGHSERQAK GSGLGLYLSR QIIAAHNGII WAENRVPTGA MFAFKLPVLP FQPSLSASDG F
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