Gene Ava_3848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3848 
Symbol 
ID3678741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4788252 
End bp4790378 
Gene Length2127 bp 
Protein Length708 aa 
Translation table11 
GC content43% 
IMG OID637719200 
Productpotassium-transporting ATPase subunit B 
Protein accessionYP_324348 
Protein GI75910052 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2216] High-affinity K+ transport system, ATPase chain B 
TIGRFAM ID[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01497] K+-transporting ATPase, B subunit 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.935004 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATCGC CATCTCGTCT CCCTCATGAA ACTCGTGACT CGCGCCAACG TACTCCTAAA 
ACAGATATGC GAGGACTCTA CCAAAGAGCT ATTAAAGAAT CATTTGTTAA ACTCCACCCC
AAAGTAGCTG CTAGAAACCC TGTAATGTTT ATTGTTTGGG TGGGGACAAT TGTGACATTT
CTCGTCACTC TTAACCCCAA CCTCTTCGGA ACAGTACAGG CAAATATCAA CCAACAACGT
CTACTCAACG GGTTGATTAC CTTAATTTTG TTTTTCACAG TCTTATTTGC CAACTTTGCT
GAAGCCGTAG CGGAAGGACG AGGTAAAGCA CAAGCAGATA GCTTAAAAGC TACCCGTTCC
GATACCATCG CCTGGAAAGT CTTACCCAAT GGTTCTCTAG AAAAAATTGG TTCTACACAA
CTGCGACGAG GCGATGTAAT CAAGGTAGTG GCCAATGATA TGATTCCCGG CGATGGGGAA
GTCATACAGG GTATTGGTTC AGTGGATGAG TCAGCCATTA CAGGCGAATC TGCCCCTGTC
CTTAAGCAAC CAGGTACAGA TATTGCCAGT TCTGTCACTG GAGGAACACG CTTACTCTCA
GATGAATTGA TAATTCGGAT TACTGCTGAT CCTGGTCAGG GTTTTATTGA CCGGATGATT
TCCCTTGTAG AAGGGGCAGA ACGTTCTAAA ACTCCGAATG AGATTGCTTT GACAGTATTG
TTAGCTGTAT TAACACAGGT TTTCTTAATC GTAGTAGCAA CCATGCCCTC TTTTGTGAAC
TATATTGCTA ACTTTATCAG CACTGCATTT GGGGCAGAGG CAGCAAACAG TTTACGCGCA
GGTGCAAGTA TCGCTATTCT GATTTCTCTA TTAGTAGCTT TGATTCCCAC AACTATAGGC
GGTTTGCTCA GTGCCATTGG TATCGCCGGG ATGGATAGGG TAGCTCAATT TAACGTCATT
GCTACCTCTG GACGAGCAGT AGAAGCCTGC GGTGATATCA ATAGTTTAGT GTTAGATAAA
ACAGGTACTA TCACCTTCGG AAACCGCATG GCTGATGAGT TTATCCCTGT GAATAACTAC
ACAGTTGAAG ATGTGGCGAG AATTGCGAAA TTAGCCAGTC TGTTTGATGA AACTCCAGAA
GGCAAATCAA TTGTCAAACT TGCAGAAAAA TACAAAATTC TGGCAGATGT TAATCTTAGC
CAAGCCGAAG GTGTGGAATT TTCTGCCAAA ACTCGGATGA GTGGCACTAA TTTACCCAAC
GGGAAGCAAG TCCGTAAAGG TGCAGTAGAT GCGATTAAGG GCTTTATCCG TTCTCGTGGT
GGTTCTGTTC CTCCTGACCT TGATGCAGCC TATGAGCGGG TTTCTTTGTT GGGGGGTACA
CCTTTAGCTG TCTGTCAAGA TGACCAAATT TTTGGAGTTA TCTATCTTAA AGATATTGTC
AAATCCGGTT TAAGAGAAAG GTTTGAGCAA TTGCGGCGGA TGGGTGTCAA GACAATTATG
CTCACAGGGG ACAATCACAT TACTGCTAGT GTAATTGCTC AAGAAGCAGG GGTTGATGAT
TTCATTGCCG AAGCAACACC AGAAGACAAG ATTGATGTAA TTCGCAACGA ACAATCTCAG
GGTAAGTTAG TCGCTATGAC TGGGGATGGT ACTAATGATG CCCCAGCCTT GGCGCAAGCT
AACGTGGGTT TGGCAATGAA CTCTGGGACA CAAGCAGCCA AAGAAGCCGC TAATATGGTG
GATTTGGATT CTGACCCCAC TAAATTAATT GATTTAGTCA CTATTGGTAA ACAGTTGTTG
ATTACTCGTG GCGCTTTGAC AACTTTCTCA ATTGCTAATG ACATCGCTAA ATATTTTGCC
ATTCTGCCTA CTATCTTTGG GGCGGCTGGT ATTGGTGCGC TGAATATTAT GGGTTTAAAA
AGCGCCCAAT CGGCAATTAT TTCGGCGCTG ATTTATAACG CTCTGATTAT TCCGGCGTTG
ATTCCTTTGG CGCTTCAAGG TGTGAAGTTT AGATCACTAA CGGCAGACCA ATTATTAAGA
CGTAACATCT TTATTTATGG TCTTGGTGGT ATTATTGCGC CTTTTATTGC CATCAAATTA
ATTGATGTGA TTTTGCCTTT TTCTTAG
 
Protein sequence
MRSPSRLPHE TRDSRQRTPK TDMRGLYQRA IKESFVKLHP KVAARNPVMF IVWVGTIVTF 
LVTLNPNLFG TVQANINQQR LLNGLITLIL FFTVLFANFA EAVAEGRGKA QADSLKATRS
DTIAWKVLPN GSLEKIGSTQ LRRGDVIKVV ANDMIPGDGE VIQGIGSVDE SAITGESAPV
LKQPGTDIAS SVTGGTRLLS DELIIRITAD PGQGFIDRMI SLVEGAERSK TPNEIALTVL
LAVLTQVFLI VVATMPSFVN YIANFISTAF GAEAANSLRA GASIAILISL LVALIPTTIG
GLLSAIGIAG MDRVAQFNVI ATSGRAVEAC GDINSLVLDK TGTITFGNRM ADEFIPVNNY
TVEDVARIAK LASLFDETPE GKSIVKLAEK YKILADVNLS QAEGVEFSAK TRMSGTNLPN
GKQVRKGAVD AIKGFIRSRG GSVPPDLDAA YERVSLLGGT PLAVCQDDQI FGVIYLKDIV
KSGLRERFEQ LRRMGVKTIM LTGDNHITAS VIAQEAGVDD FIAEATPEDK IDVIRNEQSQ
GKLVAMTGDG TNDAPALAQA NVGLAMNSGT QAAKEAANMV DLDSDPTKLI DLVTIGKQLL
ITRGALTTFS IANDIAKYFA ILPTIFGAAG IGALNIMGLK SAQSAIISAL IYNALIIPAL
IPLALQGVKF RSLTADQLLR RNIFIYGLGG IIAPFIAIKL IDVILPFS