Gene Ava_3845 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3845 
Symbol 
ID3678738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4785715 
End bp4787178 
Gene Length1464 bp 
Protein Length487 aa 
Translation table11 
GC content37% 
IMG OID637719197 
Productglycosyl transferase family protein 
Protein accessionYP_324345 
Protein GI75910049 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1928] Dolichyl-phosphate-mannose--protein O-mannosyl transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAAAA ATTGGTATCG AATTGGCTTG GTCGGTATAT TCTTACTGTC CCTGTCCTTA 
CGGTTTTGGG GACTAGATAG ATTTAATACT TTGGTATTTG ATGAAATTTA CTACGCTAAA
TTTGGTCATA ACTATCTCAA CCACATACCA TTTTTCGATG GTCATCCACC CTTAGGCAAA
TACATGATTG CTGTGGGAAT GTGGCTGAGT AGCTATATTC CTTTTTGGCA AGAGGGCGTA
AATGGATTAA CTGGTGCATT GCGCTCTCCT GGGAGTTATC GTTGGGTTAA TGCTCTATCT
GGCTCATTTA TTCCGTTAAT TATTGCCAAT ATCGCCTATC AAATAAGTTA TCGACGCAGC
TTTGCTTTAC TTGCTGGTTT ATTCACGGCT TGCGATGGTT TGTTTATTGT AGAATCTCGT
TACGCACTCA TCAATATTTA TATCGTCATA TTTGGCTTAT TAGGGCAATG GTTATTTTTA
TTAGCATTAG ATAGTCAAAA GCAGAGACGT AATTTATATT TAGTCCTAGC TGGCATAGCT
TTTGGTTGTT CAATTGCCAC AAAATGGAAT GGTTTATTTT ATTTAGTAGG TATTTATTTA
ATTTGGAGTA TAGGTTGGAT TTGGCAGTTC ATTACATCCA AAAATCAACC AAAAGATAAT
TCTACTGCTG ATGGGGAGTC TGTTATTCAT CGGAAATCAC TCTATAAAAT AACACAAATA
AATATTGGAC AAATTTTATT TTTTTTAGGG ATTATCCCCA CTGTAATTTA TAGTTTGATT
TGGATACCAC ATTTACAAAT AAATCCTAAA TATGGATTTA TTAAAGTACA TCAAGAAATA
TTAGGCTTTC ACGAACGTCT TGGAGGTAAT ACGGCTCAAG TACATCCTTA CTGCGCTGCT
TGGTATAAAT GGCCGTTGAT GATTCGGCCG ATGGCATATT ATTATCAAAC GGCGCAAAGA
GTTAATGATC CATTACCTGT TTTAGGGCCG CCTTTGCCTA GTGGTGCAGG GAAAGTGATT
TATGATGTTC ATGCAATGGG TAATCCTTTC TTATGGTGGT TTGGCGTTGC TGCATTATTA
TTTTTGCTGG GGATGCTGAT AGCAAAAGTG ATGATTCCTT TAGTAAAAGA AAAGCGCTTA
TCTTTGCCAG CAAAACTTTC TGTTGATACT TGGATTGCTT TATATATAGT CTGGAATTAC
GCTGTCAATT TATTACCTTG GACGAGGGTG TCACGGTGCG TTTTTATCTA TCATTACATG
ACAGGTGTAG TGTTTGCATT TTTAGCGATC GCCTGGTTTG TTGATCAATG TCTGCGTAGT
TATTATCGCC CATTGCGGAT TGTCGGTGTG ACGATTTCCT TTGTAATTAT TGCTGCGCTT
ATTTTTTGGC TCCCCGTTTA TTTAGGTTTA CCCCTTTCTC CTGAGGGTTA TAAAATGCGG
ATGTGGTTTA AATCTTGGGT GTAG
 
Protein sequence
MTKNWYRIGL VGIFLLSLSL RFWGLDRFNT LVFDEIYYAK FGHNYLNHIP FFDGHPPLGK 
YMIAVGMWLS SYIPFWQEGV NGLTGALRSP GSYRWVNALS GSFIPLIIAN IAYQISYRRS
FALLAGLFTA CDGLFIVESR YALINIYIVI FGLLGQWLFL LALDSQKQRR NLYLVLAGIA
FGCSIATKWN GLFYLVGIYL IWSIGWIWQF ITSKNQPKDN STADGESVIH RKSLYKITQI
NIGQILFFLG IIPTVIYSLI WIPHLQINPK YGFIKVHQEI LGFHERLGGN TAQVHPYCAA
WYKWPLMIRP MAYYYQTAQR VNDPLPVLGP PLPSGAGKVI YDVHAMGNPF LWWFGVAALL
FLLGMLIAKV MIPLVKEKRL SLPAKLSVDT WIALYIVWNY AVNLLPWTRV SRCVFIYHYM
TGVVFAFLAI AWFVDQCLRS YYRPLRIVGV TISFVIIAAL IFWLPVYLGL PLSPEGYKMR
MWFKSWV