Gene Ava_3813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3813 
Symbol 
ID3678784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4746499 
End bp4747191 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content42% 
IMG OID637719165 
Productphospholipase/carboxylesterase 
Protein accessionYP_324313 
Protein GI75910017 
COG category[R] General function prediction only 
COG ID[COG0400] Predicted esterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0993955 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGTAAAC CCTATAAGTT TAAAAATCAA AGCGGATTAC TATTAAATAG AGTAGATTTT 
AGGAGCAAAT CTCTGTCTTT GCAATTCACT ACCTTTCCCC CAGCTAACTC TCAAACACCC
GCCGGCTTAG TGGTTACTTT GCATGGTTGG GGTGCTAATG CTGAGGATGT GGCATCTTTG
TTACCCTATT TCAATTTACC TGATTACCAG TTTGTCTTTC CCAATGCACC TTATCCATAT
CCCTATGCTC CCCTTGGTAG GTCATGGTAT GACCTGAGAC AAGAAAATAT GTATGAGGGA
TTGGCGCAAA GTCGCGAACT GCTGAAAGAT TTTGTGCTTT CTTTAGAAAG TAGTACTGGT
GTGCCTTTAT CCCGCACTAT CTTAAGTGGA TTTTCCCAAG GTGGGGCGAT GACTTTTGAT
GTCGGCTCAA AATTACCGTT GGCTGGTTTG GTGGTGATGA GTGGGTATTT ACATCCTGAA
GCCATTAGCC CAGATCATAC TAATATTCCC CCAACTTTGA TTCTGCATGG TACAAAGGAT
GAAGTTGTAC CCCTGCAAGC TGCTGTTAAG GCACGCACAA CAGTAGAATC ACTGGGTGTT
CCTGTCCAAT ATCAGGAATT TGAGGCTGGA CACGAAATCA ATTTGGAAAT GTTAAATGTA
GCCAGAAATT TCATTGTCAA TGCACTTGTT TAG
 
Protein sequence
MRKPYKFKNQ SGLLLNRVDF RSKSLSLQFT TFPPANSQTP AGLVVTLHGW GANAEDVASL 
LPYFNLPDYQ FVFPNAPYPY PYAPLGRSWY DLRQENMYEG LAQSRELLKD FVLSLESSTG
VPLSRTILSG FSQGGAMTFD VGSKLPLAGL VVMSGYLHPE AISPDHTNIP PTLILHGTKD
EVVPLQAAVK ARTTVESLGV PVQYQEFEAG HEINLEMLNV ARNFIVNALV