Gene Ava_3810 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3810 
Symbol 
ID3678781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4743641 
End bp4744465 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content36% 
IMG OID637719162 
Producthypothetical protein 
Protein accessionYP_324310 
Protein GI75910014 
COG category[S] Function unknown 
COG ID[COG5464] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01784] conserved hypothetical protein (putative transposase or invertase) 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.00863066 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTTTTG ATAATGTTTG TAAGGCGCTT GCAGAGAAAT ATCCAAAAGA TTTTATCCGG 
TGGTTAATTG GTGAAGAATC TACCAATGTT AAGGTTTTAA AAACTGAATT AAGTTTAGAG
CCTATTCGCG CAGATTCTGT GATTTTTTTA CAAACTGGCA ATCTGATTTT GCATATTGAA
TTTCAGACTT TAACACAGTC TAATCCCGCG ATTCCTTTCC GAATGCTGGA TTATTCTGTG
AGATTAAAAC GTCAGTATAA GTGTCGAATT GTGCAGGTAG TAATATTTTT GCAGGAGACA
GATGATGAAA TTGCTTTTAC TGAAGAGTAT GTGAATGAGA CAACTATACA TCGCTATCGT
GCAGTCAGAA TGTGGGAGCA AGATTCCAGC TTATTTTTGG GTAATTTGGC ATTGTTACCG
TTAGCACCTT TGTGTCAAAC TGATTCTCCA CGAGATTTAT TATCGCAGAT TGCTCAGGAA
GTCGCTAGAA TTTCAGATAG AGAGACAAGG CAAAATACAG CAGCCTACAC CGAAATTTTA
GCAGGTTTGC GGTTTGAGAA GGGTTTGATT CGTCAGTTAT TAAGCGAGGA TATTATGCAG
GAATCAGTTA TTTATCAGGA TATTTTGCAG AAGGGTGAGC AGAAGGAAGC TTTTCGCTTT
TTAAATCGAC AGTTAAATCG ACGCTTTGGT GAGATAGATT TATCAATAGT GGAGCGTATT
AAAACATTAT CTACTGAAGA ATTAGAAGCA TTGGGAGAAG AATTTTTAAG TTTTTCAAAT
GTATGTGATT TAGTTGCTTG GATTGAGCAA AATACAAGTA GTTAA
 
Protein sequence
MSFDNVCKAL AEKYPKDFIR WLIGEESTNV KVLKTELSLE PIRADSVIFL QTGNLILHIE 
FQTLTQSNPA IPFRMLDYSV RLKRQYKCRI VQVVIFLQET DDEIAFTEEY VNETTIHRYR
AVRMWEQDSS LFLGNLALLP LAPLCQTDSP RDLLSQIAQE VARISDRETR QNTAAYTEIL
AGLRFEKGLI RQLLSEDIMQ ESVIYQDILQ KGEQKEAFRF LNRQLNRRFG EIDLSIVERI
KTLSTEELEA LGEEFLSFSN VCDLVAWIEQ NTSS