Gene Ava_3806 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3806 
Symbol 
ID3678776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4740254 
End bp4740793 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content44% 
IMG OID637719157 
ProductHAD family hydrolase 
Protein accessionYP_324306 
Protein GI75910010 
COG category[R] General function prediction only 
COG ID[COG2179] Predicted hydrolase of the HAD superfamily 
TIGRFAM ID[TIGR01662] HAD-superfamily hydrolase, subfamily IIIA
[TIGR01668] HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0243754 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTGGC ACAAGTTTTT ACAGCCTGAT TTAATTTTGG CGGGTTCAGT GTTGAACCTC 
ACACCAGATA TTATTCAACA CCACCAGCTC AAGGGGTTGG TTTTGGATGT AGATGAAACC
TTAGTACCAA TTACAGTAGG ATCAGCTTCA CCAGAACTGA GAGAGTGGGT AGAGCAGATT
CGCAGCGTTA CGGCGCTGTG GTTGGTGAGC AATAACATGA GTGAAGCCCG CATAGGGGGA
ATTGCCCGTT CTTTGAACTT ACCTTATTAT TTAGGTGCAG CCAAGCCCTC ACGCCGCAAA
ATTAGGGCTG CACTGCAAGA AATGAATTTA CCAGTTGAGC AGGTAGGGAT GGTAGGCGAT
CGCTTATTTA CTGATGTTTT AGCTGGTAAT CGCTTGGGTA TGTTTACCAT TCTGGTAGAG
CCAATTATCC ATCCTGATGC AGCTTTGCGC TCTCATCCTA TCCGCAATTT TGAAGTTTGG
TTCTCAGAGA TTTTAGGAGC TTCTATTAAC CCTGAGCATA CCAAAAGTTA CAAAAATTGA
 
Protein sequence
MTWHKFLQPD LILAGSVLNL TPDIIQHHQL KGLVLDVDET LVPITVGSAS PELREWVEQI 
RSVTALWLVS NNMSEARIGG IARSLNLPYY LGAAKPSRRK IRAALQEMNL PVEQVGMVGD
RLFTDVLAGN RLGMFTILVE PIIHPDAALR SHPIRNFEVW FSEILGASIN PEHTKSYKN