| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_3779 |
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| Symbol | |
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| ID | 3678806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 4707454 |
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| End bp | 4710996 |
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| Gene Length | 3543 bp |
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| Protein Length | 1180 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 637719129 |
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| Product | CheA Signal transduction histidine Kinases (STHK) |
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| Protein accession | YP_324279 |
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| Protein GI | 75909983 |
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| COG category | [K] Transcription
[N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.274137 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGACTG ATACCGAGAT TCGTGAACAA GGCTATATTT ATTTTTTAGC GGAAGCGCCA
GATTTAATTC AAACTATCGA GCAAGAATTA TTCAGTCTAG CTGAAAATCA TAGTGTAGCT
AGAGTTCATA ATTTAATGCG GGCTACTCAT ACAATTAAGG GTGGTGCTGC TACTGTTGGG
CTAAAAACAA TTCAGATGAT AGCTCATTCT TTGGAGGATG TGTTCAAGGC TTTATATAGC
CCCAAGGTAG TAATAGATGC TGAGTTACAA ACTTATTTGT TTCAGTCCTA TGAATGTTTG
CAATTGGCAT TAACATCAGA ATTAACAGGC AGCATTATTA ACGAAGAAGA ACTTTTACAA
AGAGCTACTG ATATATTTGC TAAACTCCAA GAAAAATTAG GTGATAATTT TGGTGATGAT
TCTCATATCC CTACATCTGA AGAGTTGGGA TTCGATATTG TTCAATCTAT ATTTGAAGTA
GGTGTACAGC AACGTTTAGG CAGTATTATT GAAGCTCTTA ACAATATAGA AGATGATACA
GAATTAATAG ATTTTTTTAG TTCCCAATTA GAAGTATTTG TCGGATTGGC AGAATCTTTA
AATTTACCTG GTTTTGGCGA AATTGCACAA ACAGCTTTGA CAGCCCTACA AGCTAATCCT
TCTCAAGTGC GCCAAATTAC TGAGATTGCC CATGCCGATT TAGAGCAGGC ACAACGCAAT
ATTTTAGCAG GCGATCGCAC TCATGGTGGT ACACCTTCTG CTGCTTTACA GCAATTAACA
TCAGTTGTGA CAAATCAGGC ATCTGGGGAA GTTAATTCAG AATTTTTAAT TCGACAAGAA
GAATTTTATC AGTTTTTAAC TACATTAAAC AATAATAAAA GCGAATGCCT TCAACCTGTA
ACTGCTCAAT TATATTTGAA GGTAGTTCAT TATATTTTTG GCTGGTTTAA CCACGAAAGA
GAAATACCAG AATCAGCTTT AAAATGGGAT TTACTTATTA CCAATAATGA GTTTTCCAGT
TCTATTGAAT ATATTGAAAG TTGGCTAGGT AAGTTTTTGG AATTTGTGCA GCAGGAAGTA
GATAGCAAAG GTCTTTGTCT TTATCGTCAA GGTATTATTT TAATAATACT TTTGGCAATT
GTAAAATTCC AGTATTCAGT TAAAAAAACT GCCGATAGTA TTCTCCTGAT CCAAGCTATC
CAAACTAAAA TCGCTTTAGT CGCTCAAGAA TATAAGCAAT ATCCTCCTAT TACTGCTCAA
GAAAAAAACT GGACTGATCA CCCTAAATTA CAACAACTTC TCGTTTTTAA AGATATATCA
ACTTCCTCAT CCAACATCAA TGATGGACTT TTAGAAGCAA TTTGGGGAGG AGAAGCTAAT
GAAGATGATA CTCAAGTTGA GCCACAAATA GAAGTGAACG ATATTTCCGA ATCTACAACA
TCTTTAGCTG TAGCCGAAAA ATTAAGTACA GAAATTACAG AAACAGCTCT TGATGTTGTT
AATGAGTCAA CAATCGATAA AGTTAAAAAT CATCAGGGTA AAAAGGTTCA TAAAAGCTCA
TCTGTACGTG TAGAAGTTGA GGGATTAGAA CGCATTAATT ATTTAGCTAG TGAGCTGCTG
ATTAACCAAA AAAGACGCAC TTTAAATGAT GAACAAGTGC AAGAAATTAT TGAGCAGTTA
TTACAACGTC TTAACAAACA CCAAGAAACT TTAAATCAAC TCCGTGATTT ACCACTACAA
CGGCAAAGTT TAGCAACACA ACATACACAA AGCTTTGCCT CGGTTAATTT TGATCCCTTA
GAAATGGATG CTTATACAGA ATTTCATCTG ACATTACACG AAGCCATAGA AGAGACATCA
CAATTACAAG AAGCAACAGA GTCCATCGAT TTCTTATTTA AGCAAGCTAC TCAAATTAGT
CATAAAAAAC AAAATTTAGC TTTCAGTTTG ATAGATAATT TAGTTGAAGC GAGGATGTTG
CCTTTAGAAA ATATCCTCAG CCGCTTCCCC CACATGGTAA AAAACCTCAG TACTGTTTAC
CACAAACGGG TGGATTTAAA ATTTACTGGT ACAAATGTGC TAGTAGATAA GGCGATCGCT
GAAAAGCTGT ATGATCCCCT GTTACACTTA GTCCGTAATG CTTTCGATCA TGGTATTGAA
TCTCCAGAAG TTCGCCGAGA ACGCGGTAAA CCAGAACAAG GTGTGATTGA AATCTGGGCT
TATCATCAAG GGAGTCAAAC AATTATCGAA GTCAGAGATG ATGGACAAGG CTTAAAGTTA
GATAGCATTC GTAAAAAAGC TATTGAACTG AATTTCATCT CCAACAAAGA TCAATCCAAA
GGCCATTTAT CTCAAATCAA TGATTCTGAA CTGTTAGAAT TCATGTTCGC ACCAGGATTT
ACTACTGCTG AAAAAGTTAG TGAACTTTCT GGACGCGGGA TGGGACTAGA TATTGTCCGT
TCTCAACTGC AAGCACTCAA CGGCTCAATT TCTGTGCAGA CTTTGCCTAA TCAAGGCACA
AAATTTATCC TTAAAATACC CTTTTCTATG ACTACCGATC AATTAATGCT AGTACAAGCT
GGCGGTGTTG TTTATGCTCT ACTATTGGAT AGTATTGAAA AAATAGTTAT CCCCTCAGCG
CAACAAATTC AAGAATTTGA AGGTAAACGC GTTTTACACT GGGATAGTGG TAACGAAGAT
ACTATGCTTA GTCTGCATCA ACTCTCAGAG TTGATGTATT ACAATGGTGG CTGCTTTAAT
AATTTGAATA CGAGTAATTT ATTGCCTGAG CATAATACAG AAGAGATAAA TCATCCTGTG
TTATTGCTGA GACGAAACCA AGGCATTTTC GCTTTACAAG TTGACCAAAT TATTGGTGAA
CAAGAACTAG TAATTAGACC ATTGGGGAAT GCGATCGCTC CCCCCAAATA TGTTTATGGT
TCCAGTAGTT TAGCTAATGG TAACCTTATG CTAGTTATTG ATGGTGCTTT ACTATTAGAG
TCTGTGGAGA TGCAGGCAAC CCTTGATACC TTGGCACTAC CAGCAGATGA ATATGCCAAT
CAAAAAGCCT TATCAATATC CCCATCTACT ATTCCCTCTC TACCTTTATT ATCCGCTACT
GTAGAGACTC ATCACAAATT ATCAAAAGTA ATTTTAGTAG TAGATGATGC CATTAGTTTG
CGGCAAACTC TATCCTTAAC TCTGCAAAAA TCTGGTTATC AAGTAATCCA AGCGCAAAAC
GGGGCCGAAG CTTTAGAACA GTTACAACGA CACCCAGAAA TTCAACTTGT TGTTTCCGAT
TTAGAAATGC CCCGGATGAA TGGCTTTGAA TTCTTAAGCC ATATGCAACA CAATCCTAAA
TACACCAAAC TTCCTGTAAT CATTCTCACT TCTCGTAGTG CGGAAAAGCA TCGTCAACTC
GCCCAAGAAT TAGGTGCGAA AGCTTATTTA TCAAAACCTT ATTTAGAGCA TGAGTTGATT
AATACTATTG AAAGTTTAAT TAATTCAGCA AAAGACAATT TAAATCGATT ACTCACAGTT
TGA
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| Protein sequence | MMTDTEIREQ GYIYFLAEAP DLIQTIEQEL FSLAENHSVA RVHNLMRATH TIKGGAATVG
LKTIQMIAHS LEDVFKALYS PKVVIDAELQ TYLFQSYECL QLALTSELTG SIINEEELLQ
RATDIFAKLQ EKLGDNFGDD SHIPTSEELG FDIVQSIFEV GVQQRLGSII EALNNIEDDT
ELIDFFSSQL EVFVGLAESL NLPGFGEIAQ TALTALQANP SQVRQITEIA HADLEQAQRN
ILAGDRTHGG TPSAALQQLT SVVTNQASGE VNSEFLIRQE EFYQFLTTLN NNKSECLQPV
TAQLYLKVVH YIFGWFNHER EIPESALKWD LLITNNEFSS SIEYIESWLG KFLEFVQQEV
DSKGLCLYRQ GIILIILLAI VKFQYSVKKT ADSILLIQAI QTKIALVAQE YKQYPPITAQ
EKNWTDHPKL QQLLVFKDIS TSSSNINDGL LEAIWGGEAN EDDTQVEPQI EVNDISESTT
SLAVAEKLST EITETALDVV NESTIDKVKN HQGKKVHKSS SVRVEVEGLE RINYLASELL
INQKRRTLND EQVQEIIEQL LQRLNKHQET LNQLRDLPLQ RQSLATQHTQ SFASVNFDPL
EMDAYTEFHL TLHEAIEETS QLQEATESID FLFKQATQIS HKKQNLAFSL IDNLVEARML
PLENILSRFP HMVKNLSTVY HKRVDLKFTG TNVLVDKAIA EKLYDPLLHL VRNAFDHGIE
SPEVRRERGK PEQGVIEIWA YHQGSQTIIE VRDDGQGLKL DSIRKKAIEL NFISNKDQSK
GHLSQINDSE LLEFMFAPGF TTAEKVSELS GRGMGLDIVR SQLQALNGSI SVQTLPNQGT
KFILKIPFSM TTDQLMLVQA GGVVYALLLD SIEKIVIPSA QQIQEFEGKR VLHWDSGNED
TMLSLHQLSE LMYYNGGCFN NLNTSNLLPE HNTEEINHPV LLLRRNQGIF ALQVDQIIGE
QELVIRPLGN AIAPPKYVYG SSSLANGNLM LVIDGALLLE SVEMQATLDT LALPADEYAN
QKALSISPST IPSLPLLSAT VETHHKLSKV ILVVDDAISL RQTLSLTLQK SGYQVIQAQN
GAEALEQLQR HPEIQLVVSD LEMPRMNGFE FLSHMQHNPK YTKLPVIILT SRSAEKHRQL
AQELGAKAYL SKPYLEHELI NTIESLINSA KDNLNRLLTV
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