Gene Ava_3770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3770 
Symbol 
ID3678974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4692020 
End bp4693066 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content48% 
IMG OID637719120 
ProductRNA 3'-terminal-phosphate cyclase 
Protein accessionYP_324270 
Protein GI75909974 
COG category[A] RNA processing and modification 
COG ID[COG0430] RNA 3'-terminal phosphate cyclase 
TIGRFAM ID[TIGR03399] RNA 3'-phosphate cyclase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.47166 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.173053 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGACA TTGACGGTTC CTACGGCGAG GGAGGCGGGC AAGTCCTCCG CACTTCCCTG 
AGTTTAGCCG CCATCACTGG TGAACCCATA CGTATTGCCG GTATTCGCGC CGGACGCAGG
AAGCCAGGAT TAGCAGCACA ACACTTAACA GCAGTACGTG CAGCGGCGAG AATTTGTCAT
GGGGAATTGC AGGGTGATGC TTTAGGTTCC ACGATGCTGG AATTTATCCC TGGTGGTGGG
GTAAAAGCGG GAAATTATAT TTTTGATGTC AGCGAAGTAC AGCAAGGTGG TTCAGCTGGC
GCGATTACTC TAGTTTTACA GACAATTCTC TTACCTTTAG CTTTAGCAGA CGGTGATTCT
CATATCACCT TACGGGGTGG GACTCATGTA ATTTTTAGCC CCACAGTCAC CTACATTGAG
CGAGTATATC TGCCAATGTT ATGTCGTATG GGAATCAAGG CACAAGTTAA GTTAGGTGCT
TGGGGATGGT ATCCCAGGGG TGGGGGAGAA GTAAATTTAC AGGTGAAGGG AGGCTGTCAA
CTCTGCGGTC TTAACTTGCT AGAAAGGGGA GAATTAAAGC GGGTACAAGG ATTAGCTGTG
GCGACAGAAT TACCCGCACA TATACCCCAA CGTATGGCAA ATCGGGCTGA GAATCTATTA
CGCACGGCTG GTTTGCGGGT ATCTATGCAG GCATTACGTG AAAAAGGTGT TGCACCAGGG
GCGGGTATTT TTTTAACGGC TGAGTATTGT AATAGTTTGA CGGGTTTTGG TGGCTTTGGA
CGTTTGCGGT TATCCTCTGA GAAAGTAGCC GAGATAGCTT GCGGACAACT ATTACAGTTC
CATGAAACTG GTGCGCCTGT GGATGAACAT CTAGCAGATC AATTACTATT ACCTGCTGCT
TTAGCTTCCG AGTCCAGTCA GTATAGAGTG GCTGAGGTGA GTACACACTT GACTACTAAT
GCCGCAGTGA TTGAAAAGTT TGGCTTAGGA AAGATTACAG TAAATCAAGC GGAAAGAGTG
GTAGCGATCG CCTCTGATAA AACGTAG
 
Protein sequence
MIDIDGSYGE GGGQVLRTSL SLAAITGEPI RIAGIRAGRR KPGLAAQHLT AVRAAARICH 
GELQGDALGS TMLEFIPGGG VKAGNYIFDV SEVQQGGSAG AITLVLQTIL LPLALADGDS
HITLRGGTHV IFSPTVTYIE RVYLPMLCRM GIKAQVKLGA WGWYPRGGGE VNLQVKGGCQ
LCGLNLLERG ELKRVQGLAV ATELPAHIPQ RMANRAENLL RTAGLRVSMQ ALREKGVAPG
AGIFLTAEYC NSLTGFGGFG RLRLSSEKVA EIACGQLLQF HETGAPVDEH LADQLLLPAA
LASESSQYRV AEVSTHLTTN AAVIEKFGLG KITVNQAERV VAIASDKT