| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_3760 |
|---|
| Symbol | prmA |
|---|
| ID | 3678964 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 4682250 |
|---|
| End bp | 4683170 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637719110 |
|---|
| Product | ribosomal protein L11 methyltransferase |
|---|
| Protein accession | YP_324260 |
|---|
| Protein GI | 75909964 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2264] Ribosomal protein L11 methylase |
|---|
| TIGRFAM ID | [TIGR00406] ribosomal protein L11 methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0000000149604 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.05102 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAACA CTTGGTGGGA AATACAGATT TTATGTGAAT CGGCGCTGGA AGACTCTGTT
TCTTGGCGAC TAGAAGATTT TGGTTGTCGT GGTACAGCTA GCGAAAGTAA GGGTGATTCT
TGCTTGGTTA AGGGTTATTT GCCGATATTT CAAGCACAGT TATTAGATTT GGCGGCGCTG
GGGTTATGGT TGCAGCAAGA TGCCCTGTGT ATAGGATTAT CTTCTCCTAC CTTGACTTGG
CAACTCATTG ATGAGGAAGA TTGGGCGAGT AGTTGGAAAC AATATTGGCA TCCGCAAGAA
ATAGGCGATC GCTTCCTCAT CAATCCCGCA TGGCTACCAT CACCAGAAAA CTACGATAGG
TTAGTCATCC GCCTCGACCC CGGTGTAGCA TTTGGTACAG GAAACCATGC TACCACTCAA
TTATGTCTAG AATCTCTAGA AATGAGATTG AGTCAGGTTC CAAAATCATT TGTTAGTAAA
GATGCAGGTC AAGAACCTGT GATAATTGCG GATATTGGTT GTGGTTCTGG TATCCTTTCG
ATTGGGGCAA TTCTATTAGG CGCAGAGAAA GTCTATGCAG TAGATACCGA CCCCTTAGCC
GTGCAGTCAA CCTTCAGCAA TCGCGCCCTC AACGAGGTCA ACCCAGAACG CCTCGTACCA
GCAGAAGGTA GCGTAGATAT CTTAAAGAAA CTGATTGAAC GCCCGGTAGA TGGAATTGTC
TGCAATATTC TCGCTGATGT AATTATTCAA TTAGTCCCAG AAATCAGCGA GATATCTAAA
CCTAGTACTT GGGCTATTTT TAGCGGGATT TTAGTTGAAC AATCTACTTC TGTTGTTGAG
GCTTTAGAAA AACACGGTTG GGTAGTCGCT ACTATGTGGA AACGCAAAGA ATGGTGCTGC
TTAAATGTCA GGCGTACTTA A
|
|---|
| Protein sequence | MANTWWEIQI LCESALEDSV SWRLEDFGCR GTASESKGDS CLVKGYLPIF QAQLLDLAAL
GLWLQQDALC IGLSSPTLTW QLIDEEDWAS SWKQYWHPQE IGDRFLINPA WLPSPENYDR
LVIRLDPGVA FGTGNHATTQ LCLESLEMRL SQVPKSFVSK DAGQEPVIIA DIGCGSGILS
IGAILLGAEK VYAVDTDPLA VQSTFSNRAL NEVNPERLVP AEGSVDILKK LIERPVDGIV
CNILADVIIQ LVPEISEISK PSTWAIFSGI LVEQSTSVVE ALEKHGWVVA TMWKRKEWCC
LNVRRT
|
|---|
| |