Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3737 |
Symbol | |
ID | 3678941 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 4650372 |
End bp | 4652789 |
Gene Length | 2418 bp |
Protein Length | 805 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637719087 |
Product | filamentous haemagglutinin-like protein |
Protein accession | YP_324237 |
Protein GI | 75909941 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3210] Large exoproteins involved in heme utilization or adhesion |
TIGRFAM ID | [TIGR01901] filamentous haemagglutinin family N-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.219183 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCAAA ACGGCAAAGG TAGTTCATGG CAATTGAACT TAGTAATTTC CTTAACATCT GCTGGTGTTA TGAGCATCAG TATGCCTGCT TTGATTGTGC AATCTGCCTT TGCTCAGAGT GTGATTACGC CCGATCAAAC CTTGGGTAAT GAAAGGTCTG AGGTAAGTGA AAACTACGAC AATACCCCTA CAGAGTTAGT TAGAGGAGGG GCGATTCGGG GTAATAACCT CTTCCATAGT TTCCTAGAAT TTAACGTTAA TGAAGGACGT TCAACACTTT TTGTAGCTCC CAACAGTAGC ATCCAGAACA TTTTTGTCAG AGTTACAGGT AATAATCGCT CTGATATTTT CGGGAAGTTA GAGACCTCTG GTGTTAATGC CAATTTGTTT GTGATTAATC CCAATGGGAT TTTTTTTGGG CCGAATGCCA GACTGAATAT AGGTGGTTCT TTTGTGGCGA GTACAGCTAG TGGAATTCAG TTTGGCGATC GCACCATTTT TAGCGCTACT TCTCCCCAAC CTTTACTGAC AATGAGTGTA CCTACGGGAT TGCAATTTGG CAGAACAGGG GGAGAGATCA ATTTACAAGG GGAATTAGTA GTTCCCACAG GCAAAACCCT GGCATTCGTA GGTGGCAATG TAACTCTAGA TGGTGGTAAT GTTAGCTTTC TCCGGCGTAG GACTCTCAAG GCGGAAAGTG GTCAAATTGC TATAGGTGGA ATACTAGAAG TAGGTACAGT AGGTCTAAAT TTGGCTGGTA ATAACGACAT TAACAACCAA ATTTTAAGTT TTTCTGATGA CGCAGTCTTA GGTAACGTAT TCATCCAAAA TCAAGCCAGG GTAGATGTCA GTGGTCAGGG TGCTGGTTAT ATCGAAATTA AAGGTAAGCA GATTGGACTC ACTCGTGCAT CGCAAGTGCT AGCAGAAACA GAAGGTAGTC AAAGCAGTCG CGGAATTTTT ATCCAGGCAG AAAAATTAAC CCTTGACGAT GGCTCACAAG TAACAGCATC TGTGAATAAT CCTCAATCTA CCGTTTCCGG AGGCAATGTT ACAGTCAAGG CAAGTGATTC GGTACGAGTA ACGGGAATAG TACCGAATAA TCTAGAACGT TCTGGGAATC CCAGTGGTCT GTTTACTAGA ACTGCCGGTA AAAGACCTGG GGGAAATTTG ACTATTACAA CAGGTAAATT AATTGTTGAA GATGGGGGTA ACATATCCGC TCGTACTAGT GGAAATGATA GTCAGAGTAT TGGCGGAACG ATCAAAATAA CTGCATCAGA ATTGGTCAAA CTGATCGGCA ATACTAAGGA TTCTAGAGAA TTTCCCAGTA GTGTGTTTGC TCAGACTTTG GGTGCTGGGA ATGCAGGTTC TGTGACGATT GATACTCCAG CGTTATTTGT CCAAGATGGT GCAGTCATAT CAGCTGGAAC TCAGACAAAT AGCCAGGGTA ATGGGGGAAA TATTACAATA AAAGCCTCTG ATTTTATAGA AATAAGCGGA AGTTCGCCAA TTGAGAAATT TCCTAGTGGC TTGTTTGCTC GCAGTCGAGG TAGTGGCAAC GCAGGTTCTA TATTAATTAC TACAGGTCAA CTTAATGTGC GCGATCTCGC TACAGTCACA GTAGAAACAT TAGGCACAAG TAATGCTGGC GAAATAAAAA TTAACGCCAC AAGAATCAAC CTTTATGGTA AAGCAAATTT GAACGCTACA ACTCCATTAG GTAATGGTGG TAATATCAAT TTACAAATAG ATGACCAACT ACTTTTACGC CGTGGTAGTT TCATCTCTAC TAGAGCAGGC ACTACAAGCG GTAGGGGTAA TGGCGGTAAT ATAAATATTA ATATTCCCAA TGGCTTTATC GTTGCCGTTC CTGGTGAAAA TAGTGACATT ACAGCTAATG CTTTTCAAGG TCAAGGTGGT AACGTTAGCA TCAATGCCTT TAGCGTTTTT GGCATAGAGT TTCGAGAAAA AGATAGTCCA CTCACCAACG ACATCACAGC TAGTTCTGAA TTTGGGCTAA ACGGTACAGT CGAAATCAAT ACCCCAGAAG TTCAACCGAA CCAAGGACTA ATTAATTTAC CAACACAACC TGTTGAACCC CAGCTAGCCC AAGTTTGTCA AGCAGCCGCA GGACGAAATC AAGACAGTTT TACTATCACC GGGCGTGGTG GTTTGCCAAA CAACCCTAAT GAACTCCTTT ATTCTGATGC TGTTCTTACA GATTGGGTAG CTGTGAGTAA TGTAGAAAAC ATCCCCAATA CTCCTATCAG CAAAAGCATC TCTACTCCAA CCCAAACTAA TATCGTGGAA GCTACGGGAT GGGTAATCAG CCCTCAAGGT GAAGTTGTTC TCACAGTGAA TACACCTAAT ACAAAATCCC CTAATTCTTG GCAAAAAACT AGTGCTTGTA ATTCGTAA
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Protein sequence | MTQNGKGSSW QLNLVISLTS AGVMSISMPA LIVQSAFAQS VITPDQTLGN ERSEVSENYD NTPTELVRGG AIRGNNLFHS FLEFNVNEGR STLFVAPNSS IQNIFVRVTG NNRSDIFGKL ETSGVNANLF VINPNGIFFG PNARLNIGGS FVASTASGIQ FGDRTIFSAT SPQPLLTMSV PTGLQFGRTG GEINLQGELV VPTGKTLAFV GGNVTLDGGN VSFLRRRTLK AESGQIAIGG ILEVGTVGLN LAGNNDINNQ ILSFSDDAVL GNVFIQNQAR VDVSGQGAGY IEIKGKQIGL TRASQVLAET EGSQSSRGIF IQAEKLTLDD GSQVTASVNN PQSTVSGGNV TVKASDSVRV TGIVPNNLER SGNPSGLFTR TAGKRPGGNL TITTGKLIVE DGGNISARTS GNDSQSIGGT IKITASELVK LIGNTKDSRE FPSSVFAQTL GAGNAGSVTI DTPALFVQDG AVISAGTQTN SQGNGGNITI KASDFIEISG SSPIEKFPSG LFARSRGSGN AGSILITTGQ LNVRDLATVT VETLGTSNAG EIKINATRIN LYGKANLNAT TPLGNGGNIN LQIDDQLLLR RGSFISTRAG TTSGRGNGGN ININIPNGFI VAVPGENSDI TANAFQGQGG NVSINAFSVF GIEFREKDSP LTNDITASSE FGLNGTVEIN TPEVQPNQGL INLPTQPVEP QLAQVCQAAA GRNQDSFTIT GRGGLPNNPN ELLYSDAVLT DWVAVSNVEN IPNTPISKSI STPTQTNIVE ATGWVISPQG EVVLTVNTPN TKSPNSWQKT SACNS
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