Gene Ava_3721 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3721 
Symbol 
ID3678925 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4632332 
End bp4633738 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content37% 
IMG OID637719071 
Producthistidine kinase 
Protein accessionYP_324221 
Protein GI75909925 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.620219 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.904742 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAACTC CACTTTCAAA AAAAACGGCG ATTTCGTTAC CCAATCAACC ACTCCAGCAA 
GAAAATATTA ACCTGAAACT GATTGTAGAA GGGATTGCAT CTCAGGTTGG TGAAGCCTTC
TTCCAAGCTT GCGCTCATTA CTTGGCTGAG GTACTCCAGA TTCAGTATGC TTTGATTGCA
GAGTTTATTG ATGATGAACA GCCACGAGCT AGAGTTTTGG CATTTTGGAA AGGAGAGGAA
TTTGGCCCCA ATTTTGAATA CGATCTGGCT GGAACTCCTT GCGGCGTTCT TTATCAAGAA
GGTCTTCAGA TTTACCCCGA TTGTATCCAA AAAAAGTTTC CTGATGACCT AGATTTAGTT
AACTTAAATG CGGAAAGCTA TCTAGGCGTT CCAATTTTAG ATCCTCAGGG TAAACCTCTT
GGACATATTG CTGGCTTACA TATTAAACCA TTAGAACGCA GTTACGAAGA ACAAGAGGCT
ATTTTAAAAA TATTTGCTGC TCGATCCGCA GCAGAGATTG AGCGCCAATT AGCAGAAAAA
GCACTTAAAC AGCAAAATAT TCACTTAGAA CAAACTCTCA AAGAGCTACA TAAAACCCAA
ATACAACTGA TTCAGGCAGA AAGAATGTCT AGTTTAGGAC ATCTTGTCGC AGGTATTGCT
CATGAGATCA ATAATCCCAT TGGATTCATT TATAGCAACA TTACCCATAC TAGAGAATTT
ATAAATATTC TTTTAGAACT GATTGTGGCA TATCAATTAG AATATCCTAA TCCTTCTATC
TCCCTGCAAC AGAAAATTAA AGAAGCCGAC ATAGAATTTT TACAAAAAGA TGTTGCTAAA
ATGCTTAAGT CTATGGAAAC GGGAAGCGAT CGCATTCGGG ATATCGTCCT GAGTTTACGC
AATTTCTCTC GTCTTGATGA ATCAAGCAAA AAATCAATTG ATCTGCATGA AGGGATAGAA
AGTACTTTGC TAATTCTGCA ACATCGACTG CAAGCTAATG AGCTTTTACC ACAGATCCAA
ATAATTAAAA AATACCAGCC ACTTCCTAAA GTCAATTGCC ATGCTAGCCA GATAAATCAG
GTATTTATGA ACATTTTGAG TAATGCAATC GATGCTTTAC AGTCTGCCTC TAATACAATT
ACTCAGCCAA GAATTGAAAT TAAAACAGAA GTAATTTTTC CAGAAAATAC AGTCAGAATT
TCTATTAGTG ATAATGGAAT TGGTATAGAT GAGATATCAA TATCCCACAT TTTCGATCCT
TTTTTCACCA CTAAACCCGT TGGCTCTGGT ACTGGTTTAG GACTTTCTAT CGCCTATCAA
ATTGTAGTTG AGCAGCATCG CGGAAAATTA AACTGTATTT CTACCCCAGG ACAGGACACG
AAATTTGAAA TAGAAATACC TATGTAA
 
Protein sequence
MLTPLSKKTA ISLPNQPLQQ ENINLKLIVE GIASQVGEAF FQACAHYLAE VLQIQYALIA 
EFIDDEQPRA RVLAFWKGEE FGPNFEYDLA GTPCGVLYQE GLQIYPDCIQ KKFPDDLDLV
NLNAESYLGV PILDPQGKPL GHIAGLHIKP LERSYEEQEA ILKIFAARSA AEIERQLAEK
ALKQQNIHLE QTLKELHKTQ IQLIQAERMS SLGHLVAGIA HEINNPIGFI YSNITHTREF
INILLELIVA YQLEYPNPSI SLQQKIKEAD IEFLQKDVAK MLKSMETGSD RIRDIVLSLR
NFSRLDESSK KSIDLHEGIE STLLILQHRL QANELLPQIQ IIKKYQPLPK VNCHASQINQ
VFMNILSNAI DALQSASNTI TQPRIEIKTE VIFPENTVRI SISDNGIGID EISISHIFDP
FFTTKPVGSG TGLGLSIAYQ IVVEQHRGKL NCISTPGQDT KFEIEIPM