Gene Ava_3720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3720 
Symbol 
ID3678924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4630726 
End bp4632072 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content39% 
IMG OID637719070 
Producthypothetical protein 
Protein accessionYP_324220 
Protein GI75909924 
COG category[R] General function prediction only 
COG ID[COG0312] Predicted Zn-dependent proteases and their inactivated homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.868479 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTG AGGAAGTATC TACTTTAGAA TTTAGTTTTA ATCAACTATT AGAAACTCTC 
CTAGTTAAAA AATTAGAAAA TGAACAATTC ACTGTGAAAC TTAGCAGTGA ACGTAGTCAA
TTTACTCGCT TTAATCAAGC CAAAGTTCGC CAAACTGGTT TTGTGGCTGA TGGTTGGATT
GAACTAACTC TGATGACAGA CCAGCGCAGC AGTTTTCGTC AGTTTCCTTT TACTGGAAAT
TGGGAGAAAG ACTGGCAATC AGCATATCAA GCTTTACAAG AACTGCGGGA TGAATTGCCT
TTATTACCAG TTGATCCTTA TCTAGTTTTA CCATCAGGAA ATAATACTAG TCGGGAAACC
CATATAGGTA ATATATTGCC AGCAGAGGCA GTAGTAACGA ATGTATTAGA ACAAGTTAGG
GAGTTAGATT TTACTGGTAT CTATGCTGGG GGTTTAGTTA TCAGAGCTTA TGGCGATTCT
AGTGGACAAA AACATTGGTT TGCTACTGAT TCCTTCACTT TAGATTATTC CTTATTTATC
AGTTCTGGAC AAGCTGTTAA AGGTACATTT GCTGGAAGTA ATTGGGATCA AGAAGCTTAT
TCTGTCAAAA TCAACGAAGG GAAACAGCAA TTAAAACTGC TAGCAAATCG AGCTAAAGAA
GTACCAAAAG GACAATACAA AACTTATTTT GCCCCGGCGG CTGTTGCTGA TTTATTAAGT
ATGCTTTCTT GGGGTGCAGT CAGTGAAGCA GATATCCAAC AAGGTAATAG TGCATTAGCC
ATCTTGTCAC GCCAAGATAA ACAACTTTCC CCTAAATTTA GTTTGAGAGA AAACTTCCAA
CTGGGTTTAG TACCGCGATT TAATCAACTG GGGGAAATGG CTGCACCAGA ATTATCAATA
ATTGACAAAG GAATTTTAGT AAATACCTTA GTTAATTCGC GGACTGCTAA AGAATATCAA
AAAATTGCCA ACGGTGCGAA CAGTTCGGAA ACCTTACGTG CGCCAGAGGT GATACCAGGG
AATTTAACTT ATGAGCAAAT TCTCCCCAGT TTAGATACAG GCTTATATGT ATCAAATTTG
CATTACTTGA ACTGGAGCGA TCGCCCCACA GGTAGAATTA CAGGTATGAC CCGTTACGCC
TGTTTTTGGA TAGAAAACGG TGAGATTATC GCCCCCATTG AAAACTTACG CTTTGATGAA
AGCCTCTATC GTTTTTGGGG AGAAAATTTA ATAGACTTTA CCAACATTCA AGAATTCATT
CCTGAAGTAG GAACCTACGA GAGTCGTCAA CTAGGAGGTA GTCTGGTTCC TGGAATGCTG
GTCAATGATT TTACTTACAC CTTGTAG
 
Protein sequence
MKIEEVSTLE FSFNQLLETL LVKKLENEQF TVKLSSERSQ FTRFNQAKVR QTGFVADGWI 
ELTLMTDQRS SFRQFPFTGN WEKDWQSAYQ ALQELRDELP LLPVDPYLVL PSGNNTSRET
HIGNILPAEA VVTNVLEQVR ELDFTGIYAG GLVIRAYGDS SGQKHWFATD SFTLDYSLFI
SSGQAVKGTF AGSNWDQEAY SVKINEGKQQ LKLLANRAKE VPKGQYKTYF APAAVADLLS
MLSWGAVSEA DIQQGNSALA ILSRQDKQLS PKFSLRENFQ LGLVPRFNQL GEMAAPELSI
IDKGILVNTL VNSRTAKEYQ KIANGANSSE TLRAPEVIPG NLTYEQILPS LDTGLYVSNL
HYLNWSDRPT GRITGMTRYA CFWIENGEII APIENLRFDE SLYRFWGENL IDFTNIQEFI
PEVGTYESRQ LGGSLVPGML VNDFTYTL