Gene Ava_3714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3714 
Symbol 
ID3678800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4622344 
End bp4623603 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content44% 
IMG OID637719064 
Productmajor facilitator transporter 
Protein accessionYP_324214 
Protein GI75909918 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACTA CAGCTTCTAA AGCCAATTTC AAAAACTATA TTCTCGTAAC TCTAGCCTAT 
TGGGGTTTCA CTATCACTGA TGGCGCTCTA AGAATGCTGG TGCTGCTTTA TTTCAATAAA
ATCGGCTACA CTCCCTTAGA AATCGCCTCT TTATTCCTGT TTTACGAAAT ATTCGGTATT
GTCACCAACT TTTTAGGCGG TTGGATTGGC TCACAATTAG GATTGAAGGT TACTCTCTAC
ACCGGCATTG GTTTACAGAT TTTCTCTTTA GTGATGCTGG CATATCTCAA TCCTAGTTGG
GCGCAGTGGT TGGCTGTGAT GTATGTGATG GTAGCTCAGG CGTTTTCGGG AATTGCCAAA
GATTTAACCA AGATGAGTTC TAAAAGTGCG ATTCGCTTGG TGGTTCCCCA AGATGACCAG
TCTTCCTTAT TTAAGTGGGT AGCTATATTA ACGGGTTCTA AAAATGCTCT CAAGGGAGTA
GGCTTTTTTG TTGGTAGCGC CTTGTTAGGT TTGTTTGGCT TTGTCAATTC CCTGTTAGTT
ATGGCAGGGG GATTGTTACT GCTGATGTTT ACTGGGTTAA TGTTGCCTAA AGGCATGGGC
AAAATTAAGA AGAAAGTTAA ATTTAGCCAA CTGTTTTCTA AAAGTCCAGA GATTAATATC
CTCTCAGCCG CCCGATTCTT TCTTTTTGGT TCGCGGGATG TCTGGTTTGT AGTGGCGTTA
CCAGTGTTCT TGCGTGAGGT TTTAGGTTGG TCGTTTTACC AAGTGGGTGG ATTTTTGGCG
GTGTGGGTGA TTGGTTATGG AATTATTCAA TCGTCTGCAC CATCGCTGAT TAGGCGGTTT
GGTTCTGGTC GTCCGCCACA ATCAAAGACT ATCCAATTTT GGACATTGAC ACTAACTGCT
GTGCCAGCTG CGATCGCCCT AGCTTTGCAG TTTGGTATAC CTGCTAATTT TGCCATAGTT
GGGGGACTGC TCGTGTTTGG TGTGGTGTTT GCGTTCAATT CTGCGGTTCA CTCTTACTTA
GTTTTGGCGT TCACCGACGA TGACAAAGTA GCCCTAAACG TCGGCTTCTA CTATATGGCG
AACTCCGGCG GTAGATTAGC AGGTACAGTT TTATCTGGTT TGGTATATCA ATGGCTAGGC
TTAGTTGGCT GTCTGTGGAC ATCTGCGTTT TTGGTACTAG GTGCAGCCAT AGTTTCCCTG
AGATTACCAG ATCCTCAACC AAGTAAAGCG ATCGCCTGGA AAGCTGGAGA TGGAGATTAA
 
Protein sequence
MTTTASKANF KNYILVTLAY WGFTITDGAL RMLVLLYFNK IGYTPLEIAS LFLFYEIFGI 
VTNFLGGWIG SQLGLKVTLY TGIGLQIFSL VMLAYLNPSW AQWLAVMYVM VAQAFSGIAK
DLTKMSSKSA IRLVVPQDDQ SSLFKWVAIL TGSKNALKGV GFFVGSALLG LFGFVNSLLV
MAGGLLLLMF TGLMLPKGMG KIKKKVKFSQ LFSKSPEINI LSAARFFLFG SRDVWFVVAL
PVFLREVLGW SFYQVGGFLA VWVIGYGIIQ SSAPSLIRRF GSGRPPQSKT IQFWTLTLTA
VPAAIALALQ FGIPANFAIV GGLLVFGVVF AFNSAVHSYL VLAFTDDDKV ALNVGFYYMA
NSGGRLAGTV LSGLVYQWLG LVGCLWTSAF LVLGAAIVSL RLPDPQPSKA IAWKAGDGD