Gene Ava_3704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3704 
Symbol 
ID3678790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4612444 
End bp4613226 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content45% 
IMG OID637719054 
ProductABC transporter-like 
Protein accessionYP_324204 
Protein GI75909908 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGTAAATA ACCAGTCACC CCCACTCCCC CTATTAGCAG CTAGCGGACT CTGCAAGAGT 
TTTGGCGGTA TCAAAGCTGT TCAAGAAGCG AGAATTGAAG TTGCACAAGG CAGCATCACT
GGCTTGATTG GCCCCAATGG TGCTGGGAAA ACTACCTTAT TTAACCTACT TTCAAACTTT
ATCCGCCCAG ATAAAGGACG TGTAATTTTT GATGGCGAAC CCATCCAACA GTTACAACCG
CACCAAATCG CCCAACAGGG AATGGTACGG ACTTTTCAGG TAGCCCGGAC TCTCTCCAAG
CTATCGGTGT TAGAAAATAT GCTGCTAGCC GCCCAAAAGC AAACAGGGGA GAATTTTTGG
CAGGTACAGT TACAACCCCA GGTAGTAGCA AAGGAAGAGA AGCAACTGCA AGAACAAGCA
ATGTTTTTGC TGGAATCCGT GGGTTTAGCT AAAAAAGCTT ATGATTATGC AGGCTGTTTG
TCTGGGGGAC AGCGCAAACT GCTAGAAATG GGTAGGGCTT TGATGACAAA TCCCAAATTG
ATTTTGTTGG ATGAACCAGC AGCCGGAGTC AACCCCAGAC TAATTGATGA TATTTGCGAT
CGCATCCTCA CCTGGAACCG TCAAGATGGG ATGACCTTCT TGATTATCGA ACATAACATG
GATGTGATCA TGTCCTTGTG CGATCGTGTT TGGGTACTTG CTGAAGGACA GAATTTAGCT
GACGGAACTC CAGCTGAAAT CCAAACTAAT TCTCAAGTTT TAGAGGCGTA TTTAGGTAAA
TAG
 
Protein sequence
MVNNQSPPLP LLAASGLCKS FGGIKAVQEA RIEVAQGSIT GLIGPNGAGK TTLFNLLSNF 
IRPDKGRVIF DGEPIQQLQP HQIAQQGMVR TFQVARTLSK LSVLENMLLA AQKQTGENFW
QVQLQPQVVA KEEKQLQEQA MFLLESVGLA KKAYDYAGCL SGGQRKLLEM GRALMTNPKL
ILLDEPAAGV NPRLIDDICD RILTWNRQDG MTFLIIEHNM DVIMSLCDRV WVLAEGQNLA
DGTPAEIQTN SQVLEAYLGK