Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3670 |
Symbol | |
ID | 3679226 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 4576335 |
End bp | 4577846 |
Gene Length | 1512 bp |
Protein Length | 503 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637719021 |
Product | NHL repeat-containing protein |
Protein accession | YP_324171 |
Protein GI | 75909875 |
COG category | [C] Energy production and conversion [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTCCCC GTGTAAGAGC GCCAGAACTA CCGCAAAATT ATCCTTGGTT GAATACTGAA CAACCTTTGT CTATTAAGCA ACTTAGAGGT AGAGTTGTAA TTTTAGATTT TTGGACTTAT TGTTGTATAA ACTGTCTCCA CGTTCTGCCA GATTTGAAAT ATCTGGAACA AAAATACAAG GATAGCCTGA CAGTTATTGG TGTCCATTCT GCCAAATTCG ACAACGAACA GGAAACCGAA AACATCCGCC AAGCTATATT GCGCTACGAT ATTGAACACC CAGTATTAGT AGACAAAGGT TTTCGTGTAT GGCAAGAGTA TGCTGTACGT GCTTGGCCTA CTTTAATGGT TATCGACCCC AAAGGTTATG TAATTGGCTA CGTTTCTGGT GAAGGAAATC GAGATAAGTT AGACCAATTA ATTACACAAG TCATTCAGGA ACATCAAGGC GCAATTAATT TCCAACAACT CAGCCTCACT CTAGAAAAAC AGCGTCAACC ATTAATTACA CCTCTAGCTT TTCCAGGTAA AGTTCTAGCC ACCCCAGGCG GGTTATTCGT CGCCGACTCC GGACATCACC GCATAGTTGT GAGTGACTTC AACGGTGAGA TTCTGCATTT AATCGGTAAC GGAAAGTCAG GCTTAACTGA TGGTAATTTT CAGGAAGCAC AGTTTTCCGC ACCCCAGGGA ATGGCGTTTG ATATGGAAAA TCAAATTCTC TACGTCGCTG ACACAGATAA TCATGTTGTG AGACGGGCTG ATATTCAGCA GCAAACAGTA GAAACCATTG CAGGGACAGG TGAACAAAGC CGCAATATTC AACCGCATGG GGGTGCTGGT TTAGAGACTG CTTTAAACTC CCCTTGGGAT TTGGTAAAAG TTGGAAATAG TTTATACATT GCAATGGCAG GAACCCATCA AATTTGGCAA ATGGATTTAC CAAGCGGCTT TGTCAAAACC TATGCAGGTA CAGGTGCAGA AGGTTGTTTT GATGGTTACC TGACAGAATC AGTTTTTGCC CAACCTAGTG GAATTACTAA TAATGAACAA GAATTATACA TTGCTGACAG TGAAATCAGT TCCATTCGTG GTGTAGGACT ATTGGAACCT CAGGAAGTCA GAACCGTTTG CGGTAGTGGT GGTTTATTCG GTTTTGGTGA TGTCGATGGA CAGGGTGAAA ATGTCCGTTT ACAGCATTGT TTAGGGGTGG AATATTTTCA AAATTATTTG TGGGTAGCAG ATACATACAA CCACAAAATT AAATTAGTTA GTCCTCATAC TGGTAATTGT CAAACTGTCC TGGGAGATGG TTCGGCTGGG TTACAAAATG GTCAAGGTAA AAATACGCGC TTTTTTGAAC CTTCCGGCTT GAGTGCGATG GATTCATATC TGTATATTAG TGATACGAAC AATCATGTAA TTCGCCGTGT AGATTTGCGT ACTTTGGAAG TGACGACGAT GCAATTTAAT GGTTTATGTG CGCCTGATGT TTGTATTCCA AATAACTTTT AA
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Protein sequence | MIPRVRAPEL PQNYPWLNTE QPLSIKQLRG RVVILDFWTY CCINCLHVLP DLKYLEQKYK DSLTVIGVHS AKFDNEQETE NIRQAILRYD IEHPVLVDKG FRVWQEYAVR AWPTLMVIDP KGYVIGYVSG EGNRDKLDQL ITQVIQEHQG AINFQQLSLT LEKQRQPLIT PLAFPGKVLA TPGGLFVADS GHHRIVVSDF NGEILHLIGN GKSGLTDGNF QEAQFSAPQG MAFDMENQIL YVADTDNHVV RRADIQQQTV ETIAGTGEQS RNIQPHGGAG LETALNSPWD LVKVGNSLYI AMAGTHQIWQ MDLPSGFVKT YAGTGAEGCF DGYLTESVFA QPSGITNNEQ ELYIADSEIS SIRGVGLLEP QEVRTVCGSG GLFGFGDVDG QGENVRLQHC LGVEYFQNYL WVADTYNHKI KLVSPHTGNC QTVLGDGSAG LQNGQGKNTR FFEPSGLSAM DSYLYISDTN NHVIRRVDLR TLEVTTMQFN GLCAPDVCIP NNF
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