Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3665 |
Symbol | |
ID | 3679221 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 4571951 |
End bp | 4572919 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637719016 |
Product | Fmu (Sun)/nucleolar NOL1/Nop2p |
Protein accession | YP_324166 |
Protein GI | 75909870 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAAAC CATCGAACTT ACTGCTTAAA CTTGCACGAC GTTTGTTTGA AAATCCTGAT AAACAAGAAA AATTTATCGA TGCGTTAGTT GCTCCCCAGC CTTTTAATCC CTGTATTCTG TGGTGTCAAA ATCAGCCTGA TATTTCACCT TTTTCCGTAG AATCTCCGCT AAGTTGGCAA CCGAAATTTG TTGACCGTCT GCACCTGGGA GAAAAACCCG GACAGCATAC CTTACATCAT CAAGGATATT TCTATTGTTT AGATTTTTCA TCTGTATTTG CAGCGTCTAT TTTATTAACA ATTCCTCAAT CAGTAAGCTT AGTTTTTGAT ATGTGCGCTG CTCCCGGCGG TAAAAGTGTT TTTGCCTGGC AAGCTTTACA CCCAGATTTA ATCATTTGTA ATGAAGTGAT TGGTAAACGT TTAGGAATGT TAATTTCTAA TTTAAAACGT TGTCAAATTA GCCCTTCTAT TATATTTAAT AGAGATTCTA GTATTTTTGC GGAAAATATT CCTTTATCTA GTAATTTAGT TATAGTTGAT GCCCCCTGTA CTGGGCAATC TCTATTAGCA AAAGGAGAGA AAGCACCCGG ATGTTTTCAT CCTACTGCTA TTAACAAGAG TGCAAATCGC CAAAAAAGAA TCATCGCTAA TTCTGCACAA ATTGTTGCTC CACAAGGTTA TCTTGCTTAT ATGACTTGTA CTTATTCCCC TGAAGAGAAT GAGCAGGTGT GTGAATGGTT TCTGTCACGT TTTCCCCAGT TTCAACCAGT AAGAATTAAC CATTTACAAG AGTGTCAGTC CCACTTAACA AATATTCCTT GTTATCGGTT ATTCCCCCAA GATAAACTAG GTGCTGGGGC GTTTACTGTA CTTTTTCAAA ATACTGAAGT TGGAGCAGTT AAAGAATTAG AGCCACAGAT TTTAAATGAT TTAGGTATTA TTCAAAAATT CTCACCCCTT GTATCCTAA
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Protein sequence | MEKPSNLLLK LARRLFENPD KQEKFIDALV APQPFNPCIL WCQNQPDISP FSVESPLSWQ PKFVDRLHLG EKPGQHTLHH QGYFYCLDFS SVFAASILLT IPQSVSLVFD MCAAPGGKSV FAWQALHPDL IICNEVIGKR LGMLISNLKR CQISPSIIFN RDSSIFAENI PLSSNLVIVD APCTGQSLLA KGEKAPGCFH PTAINKSANR QKRIIANSAQ IVAPQGYLAY MTCTYSPEEN EQVCEWFLSR FPQFQPVRIN HLQECQSHLT NIPCYRLFPQ DKLGAGAFTV LFQNTEVGAV KELEPQILND LGIIQKFSPL VS
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