Gene Ava_3665 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3665 
Symbol 
ID3679221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4571951 
End bp4572919 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content37% 
IMG OID637719016 
ProductFmu (Sun)/nucleolar NOL1/Nop2p 
Protein accessionYP_324166 
Protein GI75909870 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0144] tRNA and rRNA cytosine-C5-methylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAAC CATCGAACTT ACTGCTTAAA CTTGCACGAC GTTTGTTTGA AAATCCTGAT 
AAACAAGAAA AATTTATCGA TGCGTTAGTT GCTCCCCAGC CTTTTAATCC CTGTATTCTG
TGGTGTCAAA ATCAGCCTGA TATTTCACCT TTTTCCGTAG AATCTCCGCT AAGTTGGCAA
CCGAAATTTG TTGACCGTCT GCACCTGGGA GAAAAACCCG GACAGCATAC CTTACATCAT
CAAGGATATT TCTATTGTTT AGATTTTTCA TCTGTATTTG CAGCGTCTAT TTTATTAACA
ATTCCTCAAT CAGTAAGCTT AGTTTTTGAT ATGTGCGCTG CTCCCGGCGG TAAAAGTGTT
TTTGCCTGGC AAGCTTTACA CCCAGATTTA ATCATTTGTA ATGAAGTGAT TGGTAAACGT
TTAGGAATGT TAATTTCTAA TTTAAAACGT TGTCAAATTA GCCCTTCTAT TATATTTAAT
AGAGATTCTA GTATTTTTGC GGAAAATATT CCTTTATCTA GTAATTTAGT TATAGTTGAT
GCCCCCTGTA CTGGGCAATC TCTATTAGCA AAAGGAGAGA AAGCACCCGG ATGTTTTCAT
CCTACTGCTA TTAACAAGAG TGCAAATCGC CAAAAAAGAA TCATCGCTAA TTCTGCACAA
ATTGTTGCTC CACAAGGTTA TCTTGCTTAT ATGACTTGTA CTTATTCCCC TGAAGAGAAT
GAGCAGGTGT GTGAATGGTT TCTGTCACGT TTTCCCCAGT TTCAACCAGT AAGAATTAAC
CATTTACAAG AGTGTCAGTC CCACTTAACA AATATTCCTT GTTATCGGTT ATTCCCCCAA
GATAAACTAG GTGCTGGGGC GTTTACTGTA CTTTTTCAAA ATACTGAAGT TGGAGCAGTT
AAAGAATTAG AGCCACAGAT TTTAAATGAT TTAGGTATTA TTCAAAAATT CTCACCCCTT
GTATCCTAA
 
Protein sequence
MEKPSNLLLK LARRLFENPD KQEKFIDALV APQPFNPCIL WCQNQPDISP FSVESPLSWQ 
PKFVDRLHLG EKPGQHTLHH QGYFYCLDFS SVFAASILLT IPQSVSLVFD MCAAPGGKSV
FAWQALHPDL IICNEVIGKR LGMLISNLKR CQISPSIIFN RDSSIFAENI PLSSNLVIVD
APCTGQSLLA KGEKAPGCFH PTAINKSANR QKRIIANSAQ IVAPQGYLAY MTCTYSPEEN
EQVCEWFLSR FPQFQPVRIN HLQECQSHLT NIPCYRLFPQ DKLGAGAFTV LFQNTEVGAV
KELEPQILND LGIIQKFSPL VS