| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_3655 |
|---|
| Symbol | |
|---|
| ID | 3679250 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 4560610 |
|---|
| End bp | 4561401 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637719006 |
|---|
| Product | nitrate transport ATP-binding subunits C and D |
|---|
| Protein accession | YP_324156 |
|---|
| Protein GI | 75909860 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR01184] nitrate transport ATP-binding subunits C and D |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTAATT TCGTAGAAAT CAGGGAGATA AAAAAGGAAT TTGTTCAGGA TGGTAGTAAG
AATATTGTTC TCAAAGATAT CAACTTAGAA ATTCAGCAGG GAAATTTTGT ATCTCTGATT
GGGCATTCTG GGTGTGGTAA ATCTACGCTT TTAAATATCG TGGCGGGTTT AGAACAACCA
ACTCAAGGTC AGGTACGAGT CGATGGTCAA TTAGTAAAAA GACCATTCCG CGATCGCATG
GTAGTATTTC AGAATTATTC CCTATTACCC TGGCTCACTG CTTGGGAAAA TGTGGCTTTG
TTTGTCGATA AAGCCATGCC TCGGAAATCT AAAAATGAAC GTCGTGAGAT TATCGCCTCT
CACCTAGAGA TGGTTGGTTT AAAAGACGCA GCCCAGAAAA AGCCAGCGCA ACTATCGGGA
GGGATGAAAC AGCGCGTGGC CTTAGCCCGT GCTTTGGCTG TGCAACCTAA GTTACTTTTA
CTCGATGAAC CATTTGGCGC ATTAGATGCC CTCACCCGTG GTTCTTTGCA AGTAGAGTTA
ATGCGTATAT GTGACATTTA CCACATCACA ACCATCATGG TGACTCATGA TGTAGATGAA
GCATTATTAC TCTCAGATCA AGTAGTAATG TTGAAAAATG GCCCAGCCGC AACCATCGGT
CAAATATTAG ATATCCCCTT TGAACATCCC CGTTCTCTAG AAATTCGAGA TAGTCCCCAA
TATCATCACC TACGCCAACA ACTAATGCAG TTTTTACAAG GTCAAGAACA AGCTAAACGC
TTACAAGTCT AG
|
|---|
| Protein sequence | MSNFVEIREI KKEFVQDGSK NIVLKDINLE IQQGNFVSLI GHSGCGKSTL LNIVAGLEQP
TQGQVRVDGQ LVKRPFRDRM VVFQNYSLLP WLTAWENVAL FVDKAMPRKS KNERREIIAS
HLEMVGLKDA AQKKPAQLSG GMKQRVALAR ALAVQPKLLL LDEPFGALDA LTRGSLQVEL
MRICDIYHIT TIMVTHDVDE ALLLSDQVVM LKNGPAATIG QILDIPFEHP RSLEIRDSPQ
YHHLRQQLMQ FLQGQEQAKR LQV
|
|---|
| |