Gene Ava_3646 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3646 
Symbol 
ID3679241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4551252 
End bp4552502 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content50% 
IMG OID637718997 
Product3-oxoacyl-(acyl carrier protein) synthase II 
Protein accessionYP_324147 
Protein GI75909851 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase 
TIGRFAM ID[TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.136247 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGATT ATAATCGTAA ACGCGTTGTT GTCACGGGTG TTGGCGCGAT TACACCTATT 
GGTAACACAG CCTCTGAATA TTGGGAAGGA TTGTTAAGCG GACGCAATGG CATTGACTAC
ATCACCCACT TTGATGCGTC TAGCCATGAT TGTCGTATTG CTGGTGAAGT GAAAAACTTC
GACCCCCATG AGTACTTGGA GCGCAAAGAA GCCAAGCGCA TGGATCGGTT TTCCCAATTT
GCAGTTGCAG CAGCCAAACA AGCACTTGCG GATTCCCAGT TAGTCATTAA TGAACTGAAC
GCCGAACAAG TGGGGATTAT TATTGGTTCT GGGGTAGGCG GACTCAAGGT CATGGAAGAC
CAGCAAACCA TCTATCTCAA CCGTGGTCCC GATCGCTGTA GTCCCTTCAT GATTCCCATG
ATGATCGCCA ACATGGCGGC TGGACTGACA GCAATTCACA CTGGTGCTAA GGGTCCAAAT
AACTGTACCG TCACCGCTTG CGCCGCAGGC TCTAATGCGA TCGGCGACGC TTTCCGCCTA
GTTCAAGGCG GTTATGCCCA AGCCATGATT TGCGGTGGGG CTGAGGCAGC AATTACACCA
TTAGGTGTAG CTGGGTTTGC GGCTGCACGG GCGTTATCAA CTCGCAATGA TGACCCTGCT
CATGCTTGTC GTCCCTTTGA CCGCGATCGC GATGGATTTG TCATGGGTGA AGGTGCGGGA
GTTCTGATTC TGGAAGAGCT GCAACACGCC ATAAGTCGCG GCGCTCGCAT TTATGCCGAA
ATTGTTGGTT ATGGTATGAC TTGCGATGCT TACCACATGA CATCCCCAGT TCCGGGCGGC
GAAGGAGCCT CCAGAGCCAT CCAACTGGCA CTCAAAGACG CAAACATCAC CCCAGAACAA
GTTAGCTACA TTAATGCTCA CGGCACCAGC ACTTCAGCAA ACGATACCAC TGAAACCGCA
GCGATTAAAC GAGCGCTAGG AGACCACGCT TATAAAATAG CAGTCAGCTC CACCAAATCG
ATGACAGGTC ATCTTTTGGG TGGTTCTGGA GGTATTGAAG CTGTAGCCAC AGTGTTGGCA
ACTGCTCACG ACCAAATTCC ACCTACAATT AATATTCAAA ACCTTGACCC AGATTGTGAC
CTAGACTACG TGCCTGACTC TAGTCGCGCT CACAAAGTCC AGGTAGCATT GTCTAATTCT
TTTGGATTTG GTGGTCATAA TGTCACACTA GCTTTCAAAA AGTACGTGTG A
 
Protein sequence
MTDYNRKRVV VTGVGAITPI GNTASEYWEG LLSGRNGIDY ITHFDASSHD CRIAGEVKNF 
DPHEYLERKE AKRMDRFSQF AVAAAKQALA DSQLVINELN AEQVGIIIGS GVGGLKVMED
QQTIYLNRGP DRCSPFMIPM MIANMAAGLT AIHTGAKGPN NCTVTACAAG SNAIGDAFRL
VQGGYAQAMI CGGAEAAITP LGVAGFAAAR ALSTRNDDPA HACRPFDRDR DGFVMGEGAG
VLILEELQHA ISRGARIYAE IVGYGMTCDA YHMTSPVPGG EGASRAIQLA LKDANITPEQ
VSYINAHGTS TSANDTTETA AIKRALGDHA YKIAVSSTKS MTGHLLGGSG GIEAVATVLA
TAHDQIPPTI NIQNLDPDCD LDYVPDSSRA HKVQVALSNS FGFGGHNVTL AFKKYV