| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_3645 |
|---|
| Symbol | |
|---|
| ID | 3679240 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | - |
|---|
| Start bp | 4548859 |
|---|
| End bp | 4550871 |
|---|
| Gene Length | 2013 bp |
|---|
| Protein Length | 670 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637718996 |
|---|
| Product | transketolase |
|---|
| Protein accession | YP_324146 |
|---|
| Protein GI | 75909850 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0021] Transketolase |
|---|
| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.999745 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGTTG CAACCCAATC CCTCGAAGAA CTTTCTATTA ATGCAATTCG TTTCTTGGCT
GTTGATGCCA TAGAAAAAGC AAAATCGGGA CACCCCGGAC TACCGATGGG CGCGGCTCCA
ATGGCTTTTG TGCTGTGGAA CCGCTTTATG CGGTATAACC CGAAAAATCC CAAATGGTTT
AACCGCGATC GCTTTGTTTT GTCTGCCGGT CATGGTTCCA TGTTGCAGTA TGCCCTGCTC
TACCTGACAG GCTACGATAG CGTCAGTATT GAAGATATCA AGCAATTCCG CCAGTGGGAA
TCCAAAACCC CCGGACACCC AGAAAACTTC ATGACCGCAG GCGTAGAAGT CACCACCGGG
CCACTAGGTC AAGGTATTGC CAATGGTGTT GGTTTAGCGC TCGCAGAAGC TCACCTCGCA
GCTAAGTTCA ACAAACCCGA TGCCAAAATT GTTGACCATT ATACTTATGT AATTTTAGGT
GATGGTTGCA ACATGGAAGG CGTTTCCGGT GAAGCTGCCT CCCTGGCTGG ACACTGGGGA
TTAGGTAAAC TGATCGCCCT GTACGACGAC AACCACATCT CTATCGATGG TTCTACAGAT
GTAGCCTTTA CCGAAGATGT TTCCCAGCGT TTTGAATCTT ATGGCTGGCA CGTCATCCAT
GTTAAAGATG GCAACACCGA TTTAGAAGCA ATTCATAAAG CCATTGAAGA GGCAAAAGCT
GTCACCGATA AGCCCACCTT GATTAAGGTG ACAACCATTA TCGGTTACGG TTCCCCCAAC
AAATCTAATA CTGCTGGTGT TCACGGTGCA GCATTGGGTG GAGACGAAGT AGCCTTAACT
CGTCAAAATC TGGGTTGGTC ACACGACCCA TTTGTTGTTC CCGAAGATGT CCTCAACTAT
ACCCGTAAAG CAGTAGAGCG CGGTGCAGGC TACGAATCTG ACTGGAACAA AACCTACGCA
GACTACAAAG CTAAATATCC CCAAGAAGCA GCTGAATTTG AGCGTCACTT AAGCGGCAAA
CTGGCTGACG GCTGGGATAA GGTATTACCA TCCTACACCC CCGAAGATAA AGGACTTCCC
ACCCGTAAGC ATTCAGAAAC CTGCCTCAAC AAATTGGCGG CGGTTCTACC TGAACTCATT
GGTGGTTCGG CTGACTTGAC CCATTCCAAC CTCACCGAAA TCAAGGGCAA AGGCGACTTC
CAAAAAGGAC AATACCAAAA TCCCAACATC CACTTTGGTG TCCGGGAACA TGGTATGGGC
GCAATCTGTA ACGGTATTGC ACTGCATGGT TCGGGATTAA TTCCCTACGG CGCTACTTTC
TTAATCTTCA GTGATTATAT GCGCGCTCCC ATCCGCTTGT CTGCCCTGTC TCAAGCCGGT
GCAATTTGGG TCATGACCCA CGACTCCATC GGTCAAGGTG AAGACGGCCC CACCCACCAA
CCAATTGAAA CTCTGGCTTC ACTCCGTGCT ATTCCTAACC TGACAGTAAT TCGTCCCGCC
GACGGTAATG AAACCTCCGG CGCTTACAAA GTAGCAATTG AGAGAGCTAA GAACAATGCT
CCCACTTTGT TGGCGTTTAC TCGTCAAAAT GTTCCCAACT TGGCAGGTAC ATCGATTGAT
AACGTAGCTA AGGGCGGATA CATAGTTGTA GATACCGATG GCACACCAGA TTTAATCCTG
ATTGGTACTG GTTCAGAATT GAGCCTCTGT GTCACCGCAG CCGAGAAACT TAAAGCTGAA
GGCAAGAAAG TTCGTGTAGT TTCCTTGGCT GCTTGGGATT TATTTGATGC CCAAGATGCA
GCTTACAAAG AATCAGTTCT ACCTAAAGCT GTCACCAAGC GTTTAGCTGT AGAAGCGGCT
AGCAGTTTCG GCTGGCACAA ATATATTGGT AGTGAAGGCG ATGTTGTAAC TATAGACCGC
TTCGGTGCTT CTGCTCCTGG CGGCATTTGT TTGGAGAAAT TTGGCTTTAC CGTTGATAAT
GTATTAGCTA AAGCTAAACA ATTGTTGGGT TAA
|
|---|
| Protein sequence | MAVATQSLEE LSINAIRFLA VDAIEKAKSG HPGLPMGAAP MAFVLWNRFM RYNPKNPKWF
NRDRFVLSAG HGSMLQYALL YLTGYDSVSI EDIKQFRQWE SKTPGHPENF MTAGVEVTTG
PLGQGIANGV GLALAEAHLA AKFNKPDAKI VDHYTYVILG DGCNMEGVSG EAASLAGHWG
LGKLIALYDD NHISIDGSTD VAFTEDVSQR FESYGWHVIH VKDGNTDLEA IHKAIEEAKA
VTDKPTLIKV TTIIGYGSPN KSNTAGVHGA ALGGDEVALT RQNLGWSHDP FVVPEDVLNY
TRKAVERGAG YESDWNKTYA DYKAKYPQEA AEFERHLSGK LADGWDKVLP SYTPEDKGLP
TRKHSETCLN KLAAVLPELI GGSADLTHSN LTEIKGKGDF QKGQYQNPNI HFGVREHGMG
AICNGIALHG SGLIPYGATF LIFSDYMRAP IRLSALSQAG AIWVMTHDSI GQGEDGPTHQ
PIETLASLRA IPNLTVIRPA DGNETSGAYK VAIERAKNNA PTLLAFTRQN VPNLAGTSID
NVAKGGYIVV DTDGTPDLIL IGTGSELSLC VTAAEKLKAE GKKVRVVSLA AWDLFDAQDA
AYKESVLPKA VTKRLAVEAA SSFGWHKYIG SEGDVVTIDR FGASAPGGIC LEKFGFTVDN
VLAKAKQLLG
|
|---|
| |