| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_3639 |
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| Symbol | |
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| ID | 3679273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 4537870 |
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| End bp | 4539036 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637718990 |
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| Product | DevC protein |
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| Protein accession | YP_324140 |
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| Protein GI | 75909844 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR01185] DevC protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.543907 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTGTCTC AAATGTTTCG TAAAACTCCG CTAGCTTGGC GGCAGTTAAT GAAGGAAAAG
ACTCGGTTAG CGGTTGCAGT TGCTGGTATT ACCTTTGCCG ATATGCTGAT GTTTATTCAG
CTAGGGTTTG AAAGTGCGCT GTTTGATGCG GCTGTGAAAC CTCACCGCAA TTTACAAGCG
GATTTGGTGT TAATTAACCC TCAATTTCAA ACTTTGTTTT CAGTCAAGAG CTTTTCTAGA
GAACGACTAT ATCAAACCTT AGGTTATGAG GGTGTGCAGT CAGTAACTCC CCTGTATATA
GGTACTGGAC AGTGGCGTAA TCCAGAAACT CGTCAGGATA GAGCCATCTT AGTATGGGGT
ATAGATCCGG CTACATCTGC TTTTACATTT CCAGAAATCC GCAAAAATCA AGATCAGATT
AAACAGCTAA ATCAAGTCTT ATTTGATCAA GCTGGTCGCC CAGAATATGG AGCCGTGGGT
GATATTTTCA AAAAAACCAA CAGCTTTCAA ACTGAACTAA ATAATATTGG CGTTAATGTG
AGCGGTGTGT TTAGCAACGG AGCTTCTTTT GCGGCTGATG GTAACGTCAT TGCTAGCGAT
TCCACATTTT TAAGACTATT TCCCGAACGC AAACCAGAGC GCATCGAAGT GGGATTAATC
ACCCTCAAAC CGGGGGTAGA TAAAGAAAAA GTGCGATCGC AACTAGCCGC AGGCCTACCC
AATGATGTCA AAGTCTTGAC TCCCGAAGGG TTTGCCCAAA CTGAAAAAGA ATACTGGGCA
AACGGGACTG GGATTGGTTT CATTTTTGGG TTAGGTGTGG GAGTAGGTTT TATTGTGGGT
ATTGTGATTG TTTACCAGAT TCTCTACTCT GATGTTTCTG ATCACTTACC AGAATATGCC
ACCCTCAAAG CAATGGGTTA TACAGACCGC TATCTTTTGG TAGTCCTACT GCAAGAAGCA
TTGTTACTAG CTTTCCTTGG TTATCTCCCA GCGTATATCT TGTCTTTTGG GCTATATCAA
ATTACTTACG CTGCAACCAT GTTGCCCATA GCCATGAAGC TAGAACGGGC AATCACCGTA
TTTATTCTCA CTATTATCAT GTGTACCGCT TCCGGTGCGA TCGCTATGCG AAAACTCCGT
TCTGCTGATC CTGCGGATGT GTTTTAG
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| Protein sequence | MLSQMFRKTP LAWRQLMKEK TRLAVAVAGI TFADMLMFIQ LGFESALFDA AVKPHRNLQA
DLVLINPQFQ TLFSVKSFSR ERLYQTLGYE GVQSVTPLYI GTGQWRNPET RQDRAILVWG
IDPATSAFTF PEIRKNQDQI KQLNQVLFDQ AGRPEYGAVG DIFKKTNSFQ TELNNIGVNV
SGVFSNGASF AADGNVIASD STFLRLFPER KPERIEVGLI TLKPGVDKEK VRSQLAAGLP
NDVKVLTPEG FAQTEKEYWA NGTGIGFIFG LGVGVGFIVG IVIVYQILYS DVSDHLPEYA
TLKAMGYTDR YLLVVLLQEA LLLAFLGYLP AYILSFGLYQ ITYAATMLPI AMKLERAITV
FILTIIMCTA SGAIAMRKLR SADPADVF
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