Gene Ava_3638 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3638 
Symbol 
ID3679272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4537045 
End bp4537797 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content40% 
IMG OID637718989 
ProductABC transporter-like 
Protein accessionYP_324139 
Protein GI75909843 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID[TIGR02982] ABC exporter ATP-binding subunit, DevA family 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTACAAG AATTTTTACC TGGAACCACT AACTCACAAT CCTTTGATTT AGAACCCGTC 
ATTTCTGTTA GCAATCTCAA TCATTACTTT GGTTCAGGTT CGCTGCAAAA ACAGGTGTTG
TTTGATATTA ATTTGACTAT TAATGCCGGG GAAATTGTCA TTATGACGGG GCCTTCAGGC
TCTGGGAAAA CTACCTTATT AACTTTGATG GGTGGCTTGC GTTCGGCTCA AGAAGGGAGC
TTGAAGATTT TAGGGCAGGA AATATGTGGA GCTAGCAAAA ATCAATTAAC CAAACTGCGC
CGTCAAATTG GTTATATCTT CCAAGCTCAT AACCTGATGA CTTTTTTAAC AGCAAAAGAA
AACGTGCGAA TGTCTTTAGA ATTACATGAT GAGTTTTTTC ATGAAGACAT TAACGCCAAA
GCGATCGCTA TGTTAGAAAC TGTTGGTTTA GGAGAACGCG TCAATTACTA CGCCGAAAAT
TTGTCTGGAG GTCAAAAACA ACGGGTAGCG ATCGCCCGCG CCCTAGTCAG TCATCCTAAA
ATTGTTTTAG CAGATGAACC TACAGCCGCT CTAGATAAAA AATCAGGGCG TGATGTTGTG
GAACTGATGC AAAAACTAGC TAAAGAACAA GGTTGTACCA TTTTGCTAGT TACCCACGAC
AACCGTATCT TAGATATTGC TGATCGCATC ATATACATGG AAGATGGTCA GCTAAAAAGT
GACGACATGG ATATTGCCGC TAAAATGCAC TAA
 
Protein sequence
MLQEFLPGTT NSQSFDLEPV ISVSNLNHYF GSGSLQKQVL FDINLTINAG EIVIMTGPSG 
SGKTTLLTLM GGLRSAQEGS LKILGQEICG ASKNQLTKLR RQIGYIFQAH NLMTFLTAKE
NVRMSLELHD EFFHEDINAK AIAMLETVGL GERVNYYAEN LSGGQKQRVA IARALVSHPK
IVLADEPTAA LDKKSGRDVV ELMQKLAKEQ GCTILLVTHD NRILDIADRI IYMEDGQLKS
DDMDIAAKMH