Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3638 |
Symbol | |
ID | 3679272 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 4537045 |
End bp | 4537797 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637718989 |
Product | ABC transporter-like |
Protein accession | YP_324139 |
Protein GI | 75909843 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | [TIGR02982] ABC exporter ATP-binding subunit, DevA family |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTACAAG AATTTTTACC TGGAACCACT AACTCACAAT CCTTTGATTT AGAACCCGTC ATTTCTGTTA GCAATCTCAA TCATTACTTT GGTTCAGGTT CGCTGCAAAA ACAGGTGTTG TTTGATATTA ATTTGACTAT TAATGCCGGG GAAATTGTCA TTATGACGGG GCCTTCAGGC TCTGGGAAAA CTACCTTATT AACTTTGATG GGTGGCTTGC GTTCGGCTCA AGAAGGGAGC TTGAAGATTT TAGGGCAGGA AATATGTGGA GCTAGCAAAA ATCAATTAAC CAAACTGCGC CGTCAAATTG GTTATATCTT CCAAGCTCAT AACCTGATGA CTTTTTTAAC AGCAAAAGAA AACGTGCGAA TGTCTTTAGA ATTACATGAT GAGTTTTTTC ATGAAGACAT TAACGCCAAA GCGATCGCTA TGTTAGAAAC TGTTGGTTTA GGAGAACGCG TCAATTACTA CGCCGAAAAT TTGTCTGGAG GTCAAAAACA ACGGGTAGCG ATCGCCCGCG CCCTAGTCAG TCATCCTAAA ATTGTTTTAG CAGATGAACC TACAGCCGCT CTAGATAAAA AATCAGGGCG TGATGTTGTG GAACTGATGC AAAAACTAGC TAAAGAACAA GGTTGTACCA TTTTGCTAGT TACCCACGAC AACCGTATCT TAGATATTGC TGATCGCATC ATATACATGG AAGATGGTCA GCTAAAAAGT GACGACATGG ATATTGCCGC TAAAATGCAC TAA
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Protein sequence | MLQEFLPGTT NSQSFDLEPV ISVSNLNHYF GSGSLQKQVL FDINLTINAG EIVIMTGPSG SGKTTLLTLM GGLRSAQEGS LKILGQEICG ASKNQLTKLR RQIGYIFQAH NLMTFLTAKE NVRMSLELHD EFFHEDINAK AIAMLETVGL GERVNYYAEN LSGGQKQRVA IARALVSHPK IVLADEPTAA LDKKSGRDVV ELMQKLAKEQ GCTILLVTHD NRILDIADRI IYMEDGQLKS DDMDIAAKMH
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