Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3630 |
Symbol | asnC |
ID | 3679264 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 4526777 |
End bp | 4528168 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637718981 |
Product | asparaginyl-tRNA synthetase |
Protein accession | YP_324131 |
Protein GI | 75909835 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0017] Aspartyl/asparaginyl-tRNA synthetases |
TIGRFAM ID | [TIGR00457] asparaginyl-tRNA synthetase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.256869 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTAAACC GACGAATTGC AGAAATATTG CGGAGTGGTC AACCTGATGA ATCTCTGGTG GTTCAAGGCT GGGTAAGAAC GAAGCGTGAA CTCAAGGGAT TTGCTTTTAT TGAAGTTAAT GACGGCTCAT CACTAGGTAA TTTGCAAGTT GTCATCAATC AGGATTTGCC AGACTACGCA GTAATTGTCA AACAACTAAA TACAGGTGCG TCAGTTGAAG TTAATGGCGT ATTGGTGGCT TCCCAAGGAA AAGGACAGCG TATTGAATTA AAAGCCGAAG CAGTGAAAGT CTACGGTGAA GCTGACCCCG AAACTTATCC ATTGCAAAAG AAACGCCACT CTTTTGAATT TTTACGCACA ATTGGACATT TGCGATCGCG TACTAATTCC TTCGGTGCAG TCTTCCGTGT CCGTAATGCT TGTTCCGCCG CCATTCACCA ATTCTTCCAA GAAAGGGGCT TTTTGTGGGT ACACACCCCC ATTATCACAG CCAGCGATTG TGAAGGCGCA GGGGAGTTAT TTAGCGTCAC CAGCCTGGAT TTAAAGCAGA TTCCCCGCAC AGAAAACCAA GGAATTGATT ACAGCCAAGA CTTTTTTGCT AAACCCACTT ACTTAACAGT GAGTGGACAA CTGGAAGCCG AAGTTATGGC GATGGCTTTT AGCAACGTCT ACACCTTCGG CCCTACCTTC CGTGCAGAAA ACTCCAACAC TTCCCGCCAC CTAGCAGAAT TTTGGATGGT TGAGCCAGAA ATGGCATTTT GCGACTTAGA AGGCGATATG GATTTAGCTG AGGCTTTTCT CAAACACATT TTTAATCATG TGTTGGAAAA ATGCCCAGAA GACATGGAAT TTTTCAATCA ACGCATTGAT AATACTGTCT TAGCAACAGC CGAAAATATT ATTAATAATC AATTTGAGCG TTTAACTTAC ACCGATGCCA TCAAACTTTT AGAAAAAGCT GATGTTAAAT TTGAATATCC TGTAAGTTGG GGCTTAGATT TACAATCAGA ACACGAACGT TACCTAGCAG AACAACTGTT CAAAAAGCCA GTCATCGTTA CAGATTATCC CGCACAGATT AAAGCCTTTT ATATGCGGTT GAGCGACGAT GAAAAAACAG TCCGCGCGAT GGATGTCCTT GCACCAAAAA TTGGCGAAAT CATCGGTGGT TCCCAAAGAG AAGAACGTTT AGATGTATTG GAACGCCGAA TATTAGCGCA AGGGATGCAG CCAGAAGATT TATGGTGGTA TCTCGACTTA CGTCGTTATG GTACTGTTCC TCACGCTGGT TTCGGCTTGG GTTTTGAACG ACTCGTGCAA TTTATCACCG GAATGGGCAA TATTCGGGAT GTGATTCCCT TCCCCCGGAC ACCACAAAAC GCTGAGTTTT AG
|
Protein sequence | MVNRRIAEIL RSGQPDESLV VQGWVRTKRE LKGFAFIEVN DGSSLGNLQV VINQDLPDYA VIVKQLNTGA SVEVNGVLVA SQGKGQRIEL KAEAVKVYGE ADPETYPLQK KRHSFEFLRT IGHLRSRTNS FGAVFRVRNA CSAAIHQFFQ ERGFLWVHTP IITASDCEGA GELFSVTSLD LKQIPRTENQ GIDYSQDFFA KPTYLTVSGQ LEAEVMAMAF SNVYTFGPTF RAENSNTSRH LAEFWMVEPE MAFCDLEGDM DLAEAFLKHI FNHVLEKCPE DMEFFNQRID NTVLATAENI INNQFERLTY TDAIKLLEKA DVKFEYPVSW GLDLQSEHER YLAEQLFKKP VIVTDYPAQI KAFYMRLSDD EKTVRAMDVL APKIGEIIGG SQREERLDVL ERRILAQGMQ PEDLWWYLDL RRYGTVPHAG FGLGFERLVQ FITGMGNIRD VIPFPRTPQN AEF
|
| |