Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3629 |
Symbol | |
ID | 3679263 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 4524083 |
End bp | 4525852 |
Gene Length | 1770 bp |
Protein Length | 589 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637718980 |
Product | hemolysin-type calcium-binding region |
Protein accession | YP_324130 |
Protein GI | 75909834 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.170344 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAATTA TTTGTGGAAC AAATAGCAAT GACTATCTCT ACGGTGGTGA TGAGAGCGAC ACTATCAAAG GATTTGCGGG ATACGACTAT CTCTATGGCG GCTTAGGTGA TGACTATCTC TATGGTGGCT TAGATAATGA CAAACTCTAT GGCGGCTTAG GTAATGACAA ACTCTATGGT GGTGAAGGTA ATGACAATTT AAACGGAGAA GAAGGTAATA ATAGCCTCTA CGGTGAAGCA GGCGATGATA CCTTAGATGC AGGTAACTCC ACTGGGAACA ACCTTTTAGA TGGTGGAGAG GGAAATGATG AAATTTACGT TTATAGTTCC AGTGGAGATA ACACCCTCAA GGGTGGAGCT GGAAACGATA TTTTAGATGT TCGCTTTTCT TATGGAAAGA ATATCTTAGA TGGTGGTTCT GGAAATGATC AACTTTATGC TCGCTATTCC CAAGGAAATA ATAGCCTCCG GGGTGGAAGT GGAGACGATT ATCTCGGAGT TGATTTGTCT GCTGGGAATA ACATTCTCGA TGGAGGTGAT GGAAATGACA TCCTTGATAT TAGTTATCAA TGGAAAGGCA AAAATATAGT TTCAGGTGGA AACGGAAATG ATATTTTTTA TGCCTATGGA GTTCAGGGTT CTAACACTCT CAATGGTGGT AGTGGTAACG ACTCTTTCTA TATTAGTAGC CCAGATGCAA ACACAGTTGT GCATCCCTTG GCAACTCAAA CAGTTGATGG CGGAACAGGC TATGATTACT TGTGCATTGA CTATAGTAGT GCGATCGCTG GCATCACCTC AAGTTTCAAC ACTACCACCA AGCAAGGTTT AATTACCGCC GACACCAATC AAATCCGCTA CAAAAATATC GAACAATTGA AAATCATAGG TACAGCCTAT GATGACATTA TTGTCGGGGG CAACAGCGAC GATATCATTG ATGGCGGTAG TGGAGGTAAT GACACCCTCA ATGGCGGTGC AGGTAATGAC ATCTTAAGTA TTAGAGGCAA TTCACGTAAT AACAATACTG TCTATGGTGG CGCAGGAAAC GACTCTTTAT ATGCAAACGA TACTGCTGGA ACGAACTTAT TAGATGGTGG AGATGGCAAT GATTATCTGT CTGCTACGAA TAATTATTCC TACTTCTTCA ACGCCAGTCA GACTCTAATT GGTGGAGCAG GTGATGATAC CTTGGATGTT AGCGGTTCCT ATGGTAACAA CTTCCTTTAT GGAGGTGCAG GTAATGATTC CCTTTACGCA GACTATTCAG TTGGCCCCCA TACACTAGAT GGTGGTGACG GAGACGATTA TCTATCTGCC AAAGGCTCCA GCAGCCGCTT TATCATCAAT ACTCACATTC TGGATGGCGG TGCAGGTAAT GATATCTTAG ATGTTGGGTC TGCCCGTGCC AAGAATAAGC TAATCGGCGG TGGAGGTAAT GATATCCTGA TTGGTGGTTT AAATGAGGAT ACCTTTGTTT TCAAAAATTA TAACGAGGGT ATTGATCGTA TCTACAACTT CGATCATCTT GACCGCATTC AAATATGTGC CGTGGGTTTC GGTGGTGGCT TATCACCAGA TTCACTCTCT GCTGGTCAGT TTACCCTCGG CACAGTTGCT ACCACAAATG ACCAACGATT TATTTACGAC ACAAGTAATG GAGCGCTTTA CTTTGACCAA GATGGTAACG GTAGCGGATT CCATCAGGTA CAAATTGCCC AACTATATGG TGTACCTTCA CTGAGTGTCA GCAATTTTGT AGTGGTTTGA
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Protein sequence | MTIICGTNSN DYLYGGDESD TIKGFAGYDY LYGGLGDDYL YGGLDNDKLY GGLGNDKLYG GEGNDNLNGE EGNNSLYGEA GDDTLDAGNS TGNNLLDGGE GNDEIYVYSS SGDNTLKGGA GNDILDVRFS YGKNILDGGS GNDQLYARYS QGNNSLRGGS GDDYLGVDLS AGNNILDGGD GNDILDISYQ WKGKNIVSGG NGNDIFYAYG VQGSNTLNGG SGNDSFYISS PDANTVVHPL ATQTVDGGTG YDYLCIDYSS AIAGITSSFN TTTKQGLITA DTNQIRYKNI EQLKIIGTAY DDIIVGGNSD DIIDGGSGGN DTLNGGAGND ILSIRGNSRN NNTVYGGAGN DSLYANDTAG TNLLDGGDGN DYLSATNNYS YFFNASQTLI GGAGDDTLDV SGSYGNNFLY GGAGNDSLYA DYSVGPHTLD GGDGDDYLSA KGSSSRFIIN THILDGGAGN DILDVGSARA KNKLIGGGGN DILIGGLNED TFVFKNYNEG IDRIYNFDHL DRIQICAVGF GGGLSPDSLS AGQFTLGTVA TTNDQRFIYD TSNGALYFDQ DGNGSGFHQV QIAQLYGVPS LSVSNFVVV
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