Gene Ava_3606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3606 
Symbol 
ID3679298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4498293 
End bp4499336 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content46% 
IMG OID637718957 
Productaspartate-semialdehyde dehydrogenase 
Protein accessionYP_324107 
Protein GI75909811 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0136] Aspartate-semialdehyde dehydrogenase 
TIGRFAM ID[TIGR01296] aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCTAAAA CGTATCGTGT AGCTATTTTG GGAGCAACTG GTGCTGTCGG CACAGAGTTG 
CTGGAGTTGT TGGAAAGCCG TAATTTTCCG GTGGCGGAAC TAAAATTATT GGCATCAGAA
AGGAGCGTAG GCCGATCGCT CCCTTTTAAA GGTGAAAATA TAATAGTCGA GGCAGTGAGC
GATCGCGCCT TGGAAAATGT TGATATAGTT TTAGCCAGCG CTGGTGGTTC CACATCCAAA
GCTTGGGCAT CTGTAGCAGT GGAAAAAGGT GCCGTAGTTA TCGATAACTC CAGTGCCTTC
CGCATGAACC CAGATGTTCC CCTGATTGTG CCAGAGGTGA ACCCCCAAGC CGCCGCCGAC
CACAAAGGCA TCATTGCCAA CCCCAACTGC ACAACTATTT TGATGACCTT GGCTGTATGG
CCACTACATC AAGTTAGACC AGTACAACGC ATTGTGGCAG CAACTTACCA GTCTGCCAGT
GGTGCAGGTG CTAAAGCAAT GGCAGAAGTG AAAACCCAAA GCAGTGCCAT CTTGAAAGGT
GAGGAACCAG TCGCCGAAGT ATTACCTTAC CCCCTAGCAT TTAATTTATT TCCCCATAAC
TCTCCCTTGA CAGATTCGGG GTATTGTGAG GAAGAGTTGA AAATGGTCAA CGAAACCCGC
AAAATCTTTG GTACACAAGA AATTAGAATT ACAGCTACTT GTGTACGGGT TCCCGTACTA
CGCGCCCACT CAGAAGCAAT TAATCTAGAG TTCGCAGAAC CATTTTCTCC AGACGAAGCG
AGAGAAATTT TAAGTCACGC ACCTGGAGTA AAATTATTGG AAGACTGGGG AAAAAATTAC
TTCCCCATGC CCATTGAAGC TAGTGGTCGT GATGAAGTTT TAGTGGGGAG AATCCGCCAA
GATATTTCTC ACCCTTGTGG TTTAGAACTC TGGCTTTGTG GCGACCAAAT TCGTAAAGGC
GCAGCATTGA ACGCGGTACA AATAGCCGAG TTGTTGGTAG AAAAGAATTT ACTCCAACCT
ACAAAAGCTT ATGTTGCTAG GTAG
 
Protein sequence
MSKTYRVAIL GATGAVGTEL LELLESRNFP VAELKLLASE RSVGRSLPFK GENIIVEAVS 
DRALENVDIV LASAGGSTSK AWASVAVEKG AVVIDNSSAF RMNPDVPLIV PEVNPQAAAD
HKGIIANPNC TTILMTLAVW PLHQVRPVQR IVAATYQSAS GAGAKAMAEV KTQSSAILKG
EEPVAEVLPY PLAFNLFPHN SPLTDSGYCE EELKMVNETR KIFGTQEIRI TATCVRVPVL
RAHSEAINLE FAEPFSPDEA REILSHAPGV KLLEDWGKNY FPMPIEASGR DEVLVGRIRQ
DISHPCGLEL WLCGDQIRKG AALNAVQIAE LLVEKNLLQP TKAYVAR