| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_3597 |
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| Symbol | |
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| ID | 3679367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 4487240 |
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| End bp | 4488556 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637718948 |
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| Product | O-antigen polymerase |
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| Protein accession | YP_324098 |
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| Protein GI | 75909802 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.312058 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAGATAG CTTTTTATCA TCCCAAACCT AACTGCCAAT TTCCTTGGAA TTGCTTTCAA
TTAGGACTAT TAATCTTTCC CCTCACTCCC TTTGTGGGAT TTGTGAGCAT CATGCTAGCA
GTGTTAGTAA CTTGGACACG CCAATACCGC AGTATTATCC GCCGTCCTAT CAACTGGGGA
TTTGCACTGC TGAGTTTTTT GCTGTTTATT TCCGCCTGCT TTGCCAATGA CAAAACAGCC
GCTTTTGTAG GGTTGTTTAA TTTACTGCCA TTCTTTTTGT TATTTACAGG TTTAGGTTTC
CTGATTCAGA CAACTGCTCA ATTACGGCAC ATAGCTTGGA TTTTAGTTTT TGGTTCTGTA
CCAGTCGTAG TTATGGGCTT TGGGCAGTTA TTTTTCGGCT GGAACCTGCA AATACAAGTT
TTGTGGATTT TATTAGATTG GACGATCGCA CCTGGAGGTA GTCCACCAGG ACGTATGGCT
GCTCTATTTA TGCACGCCAA TATTTTTGCT GCTTATTTAG CGATCGCCTT CACATTAGGT
ATAGGATTAC TCCTAGAACA ATGGCAAGTA AGGCGCAGGG CGCAAGGAGA ATATAATTCC
CTAGCTTTGA TTATTTTCCT AACACTCTCA GTAATTGCCG ACTTTGCCGC CTTGATTTTA
ACTAACTCAC GTAACGGGTG GGCGATCGCC ATTATTGCTT GTTTAGCTTT TGCACTTTAT
CAAGGTTGGC GCTTATTAGT CGGTGGCGTT GCTGCTGTCG TCACCACAGT CTTACTGTCA
GCTTTTGCAC CTCCCCCTCT TGCTCAAGTT TTGCGCCAGA TTGTTCCTGC TTTCTTTTGG
GCGAGATTAA ACGACCAGAT GTATCCAGAT AGACCACTGG CATTGATGCG AAAAACTCAA
TGGCAATTTG CTTGGTCTTT GACTCAGCAA CGTCCTTGGA CAGGGTGGGG ACTGCGTAAT
TTTACAGACC TTTACAAAGC TCAGATGAAC ATTGATTTGG GACATCCCCA TAATTTGTTT
TTGATGTTCT CTGCTGAAAC TGGATTACCT AGTACTTTTT TATTTTTTGG ATTGCTTAGT
TGGATATTGT TTGCAGGTTC GCAGAGTTTA TGGAAATCCA ACAATATAAA TCAGCAAGAT
AAATTGATAT TTTTCAGCTA TCTTGTTGTT TTTGGAGAGT GGCTATTATT CAATACAGTG
GATGTAACTC TCTTTGATTT TAGGCTGAAT ACTCTCTCTT GGGTAGTGAT GGCTGCTATT
GCTGGAAATA TATATTATTA CAATCAACAC CAAAAAATTG TTAAAGAGGA CAATTGA
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| Protein sequence | MKIAFYHPKP NCQFPWNCFQ LGLLIFPLTP FVGFVSIMLA VLVTWTRQYR SIIRRPINWG
FALLSFLLFI SACFANDKTA AFVGLFNLLP FFLLFTGLGF LIQTTAQLRH IAWILVFGSV
PVVVMGFGQL FFGWNLQIQV LWILLDWTIA PGGSPPGRMA ALFMHANIFA AYLAIAFTLG
IGLLLEQWQV RRRAQGEYNS LALIIFLTLS VIADFAALIL TNSRNGWAIA IIACLAFALY
QGWRLLVGGV AAVVTTVLLS AFAPPPLAQV LRQIVPAFFW ARLNDQMYPD RPLALMRKTQ
WQFAWSLTQQ RPWTGWGLRN FTDLYKAQMN IDLGHPHNLF LMFSAETGLP STFLFFGLLS
WILFAGSQSL WKSNNINQQD KLIFFSYLVV FGEWLLFNTV DVTLFDFRLN TLSWVVMAAI
AGNIYYYNQH QKIVKEDN
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