| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_3596 |
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| Symbol | |
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| ID | 3679366 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 4480827 |
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| End bp | 4486880 |
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| Gene Length | 6054 bp |
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| Protein Length | 2017 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637718947 |
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| Product | Serine/threonine protein kinase and Signal transduction histidine kinase (STHK) with GAF sensor |
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| Protein accession | YP_324097 |
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| Protein GI | 75909801 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0515] Serine/threonine protein kinase
[COG3899] Predicted ATPase
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.107255 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATACAT ATGTAGATTT GGCGATCGCA ATTCCTGGTT ATTTTGTATT AGAAGAAATT
TATCATGGCT CCAAAACAGT TGTTTATCGG GCAGTAAGAG AAGTAGATCA GCAACCCGTG
GTGATTAAAC TGCTCAAGCG CGAGTATCCT ACTTTTAGTG AACTGTTACA GTTTCGCAAC
CAGTATGCGA TCGCTAAAAA CTTAAAGATT CCCGGCATTG TCAAGTTATA TAGCTTGGAA
GCATACCGCA ATAGTTATGC AATGGTAATG GAAGATTTTG GCGGCATTTC TTTACGAGAT
TATGCTCAGC AGCAATTGCT TTCCTTAACT GAAATTTTGA CCATTACCAT TCAACTAGCA
GATATTCTGC ATCATCTTTA CCAACAAAGG ATAATTCATA AGGATATCAA ACCCGCAAAT
ATTCTCATTA ACCCAGAAAC TAAACAAGTT AAATTAATCG ATTTTAGTAT CGCCTCCCTA
CTTCCTAGAG AAACCCAAAG TATTATTAGT CCTAATATTT TAGAAGGAAC TCTTGCCTAT
TTATCACCGG AACAGACTGG AAGAATGAAC CGAGGAATTG ATTATCGTAG TGATTTTTAT
TCTTTGGGGG TTTCACTTTT TGAATTACTC ACTGGACAAT TACCATTTAC TTCTGATGAT
CCAATGGAGT TGGTTCATTG TCATATTGCT AAACAACCAG ACCAATTCAA ACTACCCTCC
TCCTTCCCTA AGGAAGACTA TGGGAACGGG TTCCCCAACG GAATACAAAC TGCAAAATTG
CCAAATGGGG AAACCATTCC CCAAGTTGTT GGTGAGATCG TGATGAAGTT AATGGCAAAA
AATGCCGAAG ACCGTTATCA AAATGCCTTG GGTTTAAAAT ATGATTTAGA AAAATGTCTA
GCAGAATTAC AAGAGACTGG TAAAGTCGAA TACTTTACAA TTGGTAGTCG GGACGTATGC
GATCGCTTTC TGATTCCTGA CAAACTCTAT GGTCGAGAAG CAGAAATAGA AACTTTACTA
GCAGCCTTTA CTAGAGTGAG TCTTGGTGCT ACAGAATTGA TGCTAGTAGC TGGTTTTTCT
GGAATTGGTA AAACGGCGGT AATCAAAGAA GTTCATAAAC CTATTGTTCG TCAACGGGGC
TATTTTATTC AGGGTAAATT CGACCAATTT CAACGGAATC TTCCCTTCTC AGCATTTGTG
CAAGCTTTCC GTAATTTAAT GGGGCAATTA CTTACAGAAA GTGATACTCA AATTCAGCGA
TGGCGAGGCA AGATACTAGA AGCTGTAGGT GACAATGGAC AGGTAATTAT CGAAGTCATA
CCAGAGTTGG AACGAATTAT TGGTAAGCAA CCACCAGCAC CAAAACTATC AGGTACGGCT
TTACAAAATA GATTTAATTT ATTATTTAAA AAATTCACTC AAGTGTTTAC TAGTGCTGAA
CATCCACTTG TAATTTTTCT TGATGATTTG CAATGGGCTG ATTCTGGTTC ATTGAAATTA
ATTCAGTTGT TAATGAATGA TACAGGTTAT CTGCTTTTAA TTGGTGCATA TCGGGATAAC
GAAGTGAATC CAGCACATCC ACTAATGTTA ACAGTGAATG AAATTGGCAA AGATAATTGC
ACCATCAAGA AGATTGATTT AGCACCATTA AATCAATCGC AGGTGAATAC ATTAGTGGCG
GAAACACTTA AATGTTCGGA GGAAATAGCC CAGTCTTTGG CTTTATTAGT ATTTCAAAAA
ACTCAGGGTA ATCCTTTTTT TACTACACAA TTTCTTAAGG CACTATACCA CGATAATCTA
ATTCAATTTA ACGGCGATTT AGGCTGTTGG CAGTGTGATA TTGCCCAAGT TAATCACCAA
GCTTTGACAG ATGATGTGGT TGCCTTTATG GCATTTCAAT TACAAAGACT GCCACGAGCA
ACTCAAGAAA TATTGCAGTT AGCAGCTTGT ATTGGCAATC AATTTGATTT AGAAACTTTA
GCAATTGTTT GGGAATCATC GCCCACGAAA ACGGCTGCTT GTTTATGGAA GGCATTAGAA
GAAGGTTTGA TTATACCCCA AAGTGAAGTT TATAAGTTTT TTGTTGGGCA AGAACAGGAA
ATAGATCATG CACAAACTAC GGAGATTTTT ACATATAAGT TTCTTCATGA CAGGGTGCAA
CAAGCTGCCT ATTGTTTGAT TCCAGAAGCT GAACGCGCGA TCGCTCATCA CAACATAGGA
CAATTACTAC TACAAAAAAT CTCCCCCGCA GCGAGAGAGG AGCATATCTT TGAAATAGTT
AATCAGTTAA ACTACGGCAT TACACTGATT ACACAACAAA GCCAACGGGA TGAACTCGCC
CAACTCAACC TGAATGCGGC ACAAAAAGCC AGAGCGGCAA CAGCTTATCA AGCCAGTCGT
GAATACGCTG ACACAAGCAT CATACTTTTA GGTGAAACTG CTTGGCAGCG ACAATATCAA
TTGACTCTCA CCATCCATGA ATTAGCGGCG GAGATTGCCT TATTGTGTGG GGATGTTGAG
CAGATGAACC AGTTAATTGA GACGGTGGTT AACCGTGCCA AATGCCCTTT GGATCGGGTG
CAAGTTTACC AAGTTAAAAT CCAAGCTCTC ACCTCCCGCA ATGAGTTGTT AGAAGCGATC
GCCACAGGTA CATCCCTCCT GCAAGAACTA GGAGTCAGCT TGCCTGATCA TCCGACTCCA
GAGGATGTAC AGCAGGCTAG AGAAGAAATT AACAGATTAA TTGGCGATCG CCACCTAGAG
GAATTTATCA ATCTGCCGAA GATGACAGAT CCGGAAAAAC TTGCCATCAT GCAAATTTCC
AGCAGCCTCA TCCCCGCTTG TTACATGACT GGTTCACTGT TGTATCTGTT GATTGTTCCT
CTACAGGTGA AACTTTCTGT GCAATTTGGT AACAGTCTGT TTTCTGCTCA TGGTTACGTG
AGTTATGCCT TCCAACTGAG TACAACATGG CAAGATATGG CGTTGGCGCA GCAGTTGGGA
CAAATAGCTT ACCAACTAGC CTCCGAGCCA GAGGCGAAAA ACGTTCGCGC CGCCACTTTC
ATTGTCTTGG GAGGATATTT TTATCACTGC ACAGCTCATC TGCAAGACAC ACTGCCAATT
ATCCAAGAAG GATGTATTGC AGGATTAGAA ACAGGTAATT GGGAATTTTT TGGCTACAAC
GTGCAGAATT TTGGGATGAA CGCTTACTGG AGCGGTGAAT CTTTGAGCGA ATTTGCATCC
CAAATTTCTA CTTATTACCA GCAGTTACTC GAATTTAATT TGGTGACAAG TGCAAATCAT
TGTTTCGTTT ATTGGGAATC AGCATTGACT TTACTAGGAA AACCAACTGA TGAGATTTCA
TTACGCCAAG ATGCCTATGG AGAGAAAATT GTCACTGAAG CAGTAGCTGC TAACGATTTG
TGGCGATTAT TCCAGTTTTA CCTGTATCGC TTGGTGCTGA ATTTTCTGCT AGCAGATCCT
CGCGCCAAAC AAGATGCAGA AACAGCCAGA CAGTATTTAA CTGGCTGTAT GGGGAGTGTA
GCCGAACCAA TTTTTTACTT CTACGATTCC TTAATAGCAC TGGCTGAACT TCACTCATCA
CCAGCCGACA GTGATAGTCA ATGGCAACGA ATCCGAGAAA ATCAAGCCAT TCTGGACAAA
TGGGCGAACC ATGCGCCGAT GAATTACTTA CATAAATGGC AATTGGTAAC AGCAGAAATA
CATCGTCTGC TGGAGCAGAA AACTGAGGCC ATGGAATTTT ATGAGATGGC AATTAAAGGT
GCAAAAGAAA ATAAATACCT CCGAGACGAA GCCCTAGCCA ATGAACTTGC AGCAAAGTTT
TATCTGGATT GGGAAAAAGA AAAAGTTGCC GCAGTTTATA TGCAGGAGGC TTACTATTGC
TATGCCCGTT GGGGTGCTAA AGCCAAAACT AACGACTTAG AAAAACGCTA TCCCCAACTA
CTCCAACCCA TTTTGCAAGA ACGACAGTTT AAATTTAACG CCCAAGAAAC TATAGCTGTT
TCTGGCACAT CTTCATCTAC CCTCATTTCC GCAGTAGGCA GTGCTAGTAT CTCCGACACC
CTAGATTTTG CCTCTATCTT AAAGGCTGCT CAAGTTATTT CCACTTCCTT AGAATTAGAC
GAACTCATCA CCAATCTCAC TGAGATTATT TTAGAAAACT CTGGGGCAAA AAAATCTGCA
CTGCTGCTTC CCCAGGAAGA TATTTGGCAA ATCAAAGCCA TGACTTTGAG CAACCTCCAA
CCAAATTCTT CCGAGTCTAC CCAAACTATT CTGGAATCAC AACCATTAGA AACTTGTGAA
GATATCCCCA AAAACATTAT TTACTATGTC AAAAATACTC AACAAACCGT TGTCATAGAT
AATCTACAAA CAGATATTCC CGGACTGATT GGGGAATATA TGTTACAAAA TCAACCCCAG
AGCGTATTTT GTACGCCAAT GATGAATCAG GGGCATTTAG TGGGGATTCT CTATTTAGAA
AATAGACTAA CAAGGGGAGT ATTTACTAGC GATCGCCTGG AAGTGATCCG CCTCTTATCT
GCCCAAGCCG CAGTCTCTCT AGAAAAAGCT CGTCTTTATC AAGAATCTCA AACAACAGCT
CAACAGCTAA AACAATCCCT CAAACAACAG AAAATCTTGT TTGATGTTGT TAATCAGATG
CGCCAGTCTT TAGACTTGAA TGCTATTTTC TGCGTAGTTA CCCAAAATAT TCGTCGTATT
CTCGATGTTG ATCGGGTGGG AATCTATCAG TTTCACCTAG ATGTAAATTA TGAATATGGT
GAGTTTGTCG CCGAAGATGT ATCACCTGCA TTTCCTTCCG CTCTCGCAGT CAAAGTTCAA
GATCACTGCT TTGGCGAAAA CTATGCCAAC CTCTATAAAC AGGGACGCAT CTGTGCAATA
ACCGATGTAC AATCATCGGA GGTTTTAGAT TGTCATCGGC AAATTTTGGC ACAGTTCCAT
GTTAGAGCAT CATTGGTAGT GCCAATTATG CAGGAAGAAG AACTGTGGGG ACTACTTTGT
ATTCACCAAT GCGATCGCCC TCGTCAATGG GAACCTTTGG AAATGCAGTT TGCCCAGCAA
GTCGGCGCGC AAATGGGTAT TGCCCTCAAG CAAACAGACT TATTAATCCA AACGCAAAAA
CAAGCCACCC AACTAGAACA CACGCTGCAA CATCTCCAGC AAACCCAACT TCAGTTAGTG
CAGAATGAAA AAATGTCTGC ATTGGGTAAT TTAGTTGCAG GGGTAGCCCA TGAAATGAAT
AATCCTTTGG GCTTTATTGC CGTCAGTCTG CAACATACTC AACCCACCTT TGCTGATATT
GTGGAGCATT TGAAACTATA TCAAGAAAGT CTGCCCCATC CTGGAGATAA AATTCTCCAT
CATGCCGCAC AAATCGATTT AGATTACACT TTAGAAGACT TACCCAAGTT AATTGAGGCG
ATGGTAATGG CGTGCGATCG CCTCAAAAAT ATCAGCACCA GTCTTCGCAC TTTTTCACGG
GCAGATAAAG ATTACAAAAT ACCTTTTAAC ATTCATAAAG GTATCGATAG TACCATTTTA
ATCTTGAAAC ATCGATTGAA ATCTAACGAC AAACGTCCAG CTATTGAGGT AATAACTAAG
TACGGTAATT TACCCCACAT TGAATGCTTT CCCGGACAAT TGAACCAGGT CTTTATGAAT
ATCTTAGCCA ATGCTATTGA TGCTTTAGAA GACGCAAATA ATGGTTTGAG TTATGCGGAA
ATTGCAGCGA ATACTAACCG CATTATCATT CGTACCACCC AAGTAAATAA CCACGTCAAA
ATTTCTATTG CTGATAATGG TATCGGCATG AGTGAAGAGT TAAAGCAAAA TATATTTGAG
CATTTATTTA CGACCAAAGG CGTAGAAAAA GGTACAGGAT TAGGACTAGC GATCGCTCGT
CAAATTGTTG TAGAAAAGCA TGGTGGAACA ATCGAGGTCA ATTCTCAACT AGGTCAAGGT
ACTGAATTTG TGATTATTTT GCCTATAACA GCAGAAAGAG CCAATAAATA TTGA
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| Protein sequence | MNTYVDLAIA IPGYFVLEEI YHGSKTVVYR AVREVDQQPV VIKLLKREYP TFSELLQFRN
QYAIAKNLKI PGIVKLYSLE AYRNSYAMVM EDFGGISLRD YAQQQLLSLT EILTITIQLA
DILHHLYQQR IIHKDIKPAN ILINPETKQV KLIDFSIASL LPRETQSIIS PNILEGTLAY
LSPEQTGRMN RGIDYRSDFY SLGVSLFELL TGQLPFTSDD PMELVHCHIA KQPDQFKLPS
SFPKEDYGNG FPNGIQTAKL PNGETIPQVV GEIVMKLMAK NAEDRYQNAL GLKYDLEKCL
AELQETGKVE YFTIGSRDVC DRFLIPDKLY GREAEIETLL AAFTRVSLGA TELMLVAGFS
GIGKTAVIKE VHKPIVRQRG YFIQGKFDQF QRNLPFSAFV QAFRNLMGQL LTESDTQIQR
WRGKILEAVG DNGQVIIEVI PELERIIGKQ PPAPKLSGTA LQNRFNLLFK KFTQVFTSAE
HPLVIFLDDL QWADSGSLKL IQLLMNDTGY LLLIGAYRDN EVNPAHPLML TVNEIGKDNC
TIKKIDLAPL NQSQVNTLVA ETLKCSEEIA QSLALLVFQK TQGNPFFTTQ FLKALYHDNL
IQFNGDLGCW QCDIAQVNHQ ALTDDVVAFM AFQLQRLPRA TQEILQLAAC IGNQFDLETL
AIVWESSPTK TAACLWKALE EGLIIPQSEV YKFFVGQEQE IDHAQTTEIF TYKFLHDRVQ
QAAYCLIPEA ERAIAHHNIG QLLLQKISPA AREEHIFEIV NQLNYGITLI TQQSQRDELA
QLNLNAAQKA RAATAYQASR EYADTSIILL GETAWQRQYQ LTLTIHELAA EIALLCGDVE
QMNQLIETVV NRAKCPLDRV QVYQVKIQAL TSRNELLEAI ATGTSLLQEL GVSLPDHPTP
EDVQQAREEI NRLIGDRHLE EFINLPKMTD PEKLAIMQIS SSLIPACYMT GSLLYLLIVP
LQVKLSVQFG NSLFSAHGYV SYAFQLSTTW QDMALAQQLG QIAYQLASEP EAKNVRAATF
IVLGGYFYHC TAHLQDTLPI IQEGCIAGLE TGNWEFFGYN VQNFGMNAYW SGESLSEFAS
QISTYYQQLL EFNLVTSANH CFVYWESALT LLGKPTDEIS LRQDAYGEKI VTEAVAANDL
WRLFQFYLYR LVLNFLLADP RAKQDAETAR QYLTGCMGSV AEPIFYFYDS LIALAELHSS
PADSDSQWQR IRENQAILDK WANHAPMNYL HKWQLVTAEI HRLLEQKTEA MEFYEMAIKG
AKENKYLRDE ALANELAAKF YLDWEKEKVA AVYMQEAYYC YARWGAKAKT NDLEKRYPQL
LQPILQERQF KFNAQETIAV SGTSSSTLIS AVGSASISDT LDFASILKAA QVISTSLELD
ELITNLTEII LENSGAKKSA LLLPQEDIWQ IKAMTLSNLQ PNSSESTQTI LESQPLETCE
DIPKNIIYYV KNTQQTVVID NLQTDIPGLI GEYMLQNQPQ SVFCTPMMNQ GHLVGILYLE
NRLTRGVFTS DRLEVIRLLS AQAAVSLEKA RLYQESQTTA QQLKQSLKQQ KILFDVVNQM
RQSLDLNAIF CVVTQNIRRI LDVDRVGIYQ FHLDVNYEYG EFVAEDVSPA FPSALAVKVQ
DHCFGENYAN LYKQGRICAI TDVQSSEVLD CHRQILAQFH VRASLVVPIM QEEELWGLLC
IHQCDRPRQW EPLEMQFAQQ VGAQMGIALK QTDLLIQTQK QATQLEHTLQ HLQQTQLQLV
QNEKMSALGN LVAGVAHEMN NPLGFIAVSL QHTQPTFADI VEHLKLYQES LPHPGDKILH
HAAQIDLDYT LEDLPKLIEA MVMACDRLKN ISTSLRTFSR ADKDYKIPFN IHKGIDSTIL
ILKHRLKSND KRPAIEVITK YGNLPHIECF PGQLNQVFMN ILANAIDALE DANNGLSYAE
IAANTNRIII RTTQVNNHVK ISIADNGIGM SEELKQNIFE HLFTTKGVEK GTGLGLAIAR
QIVVEKHGGT IEVNSQLGQG TEFVIILPIT AERANKY
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