| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_3594 |
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| Symbol | |
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| ID | 3679364 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 4478407 |
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| End bp | 4479267 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637718945 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_324095 |
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| Protein GI | 75909799 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.046742 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATATAG CTGAAATTAG TCAAGTTGCT CTAGCTCTTT TAACACAGTT TGGACTGAGA
GTTTTAGGAG CGATCGCTCT TTGGATTATT GCTCAATGGT TGATTGATTT TGGCTTAAAG
TTACTGCGCC GTGCTTTTCG CAATAAACAC GTTGAGCCTA CACTAGTTAA CTATATTGTG
AATATAGTTA ATGTAATCCT GAAAATTGTT TTAATCGTAG CAATTCTTGG CTTTTTCGGC
ATAGAAACTA CTTCTTTTGC AGCATTACTA GCGGCGGCTG GTATAGCCAT TGGCGCGGCT
TGGAGTGGTC TTTTAGCTAA CTTTGCGGCT GGTGCATTTT TAATTATTTT TCGCCCATTT
ATGGTTGGTG ATACTATTCA AGCAGCAGGA GTTACAGGAA CAGTAGAAGA AATTGGACTG
TTTACTACAA CTATCAATAC ACTCGATAAT GTAAAGACAA TTATTGGTAA TAATAAAATA
TTTGCTGATA ATATCCAGAA TTTTTCTGCC AATCCTTACC GTCGTGTTGA CTTACAAGCA
CAACTGCATC ACGCAGTTGA TCCTACGGAT GCAATTAGGC GTTTAAAAGA GAGAATTAGC
CAAATTCCTC ATGTATTAAA TAATCCTGCA CCAGATGTAG AAATATTGGA ATTCAATTTA
GCAGGGCCAG TATTAGCAGT GCGTCCTTAT TGCCATAATG AAAATTACTG GCAAGTTTAT
TTTGATACCA ATAAAACCAT CAGGGAGACT TTTGGTCAAG CTGGTTATCC AATTCCCGAA
CAACGCTATA TGTTTAGCGG ACAATCACCA GATGGAACAT CAGCTAATAC TATCCAACAA
ACATCTTTAG GAAGAGGCTA G
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| Protein sequence | MNIAEISQVA LALLTQFGLR VLGAIALWII AQWLIDFGLK LLRRAFRNKH VEPTLVNYIV
NIVNVILKIV LIVAILGFFG IETTSFAALL AAAGIAIGAA WSGLLANFAA GAFLIIFRPF
MVGDTIQAAG VTGTVEEIGL FTTTINTLDN VKTIIGNNKI FADNIQNFSA NPYRRVDLQA
QLHHAVDPTD AIRRLKERIS QIPHVLNNPA PDVEILEFNL AGPVLAVRPY CHNENYWQVY
FDTNKTIRET FGQAGYPIPE QRYMFSGQSP DGTSANTIQQ TSLGRG
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