Gene Ava_3585 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3585 
Symbol 
ID3679355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4465555 
End bp4466292 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content47% 
IMG OID637718936 
Productphycocyanobilin:ferredoxin oxidoreductase 
Protein accessionYP_324086 
Protein GI75909790 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.561892 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0200749 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACTTA CTTCCATTCC CTCGCTACGT GAGCAACAAC ATCCCCTCAT TCGCCAACTA 
GCTGACTGTA TTGAAGAAGT TTGGCATCAG CACTTGGATT TGTCGCCTTA CCATTTGCCT
GCTGAGTTGG GGTATGTGGA AGGGAGACTA GAGGGTGAGA AACTGACGAT TGAAAACCGT
TGCTATCAAA CACCCCAGTT TCGGAAGATG CACTTGGAAT TAGCCAAGGT AGGAAATATG
CTCGACATCC TGCACTGTGT GATGTTTCCC CGTCCAGAGT ATGACCTACC GATGTTTGGC
TGTGACTTGG TTGGGGGTAG GGGTCAAATT AGTGCAGCGA TCGCTGACCT TTCTCCTGTA
CACTTAGACC GCACCCTACC TGCATCCTAT AATTCGGCGC TGACAAATCT CGACACACTA
AATTTCTCTC AACCCAGAGA ATTGCCAGAA TGGGGAAATA TCTTCTCTGA TTTCTGCATT
TTTGTGCGTC CGAGTTCGCC AGAAGAAGAG GCGATGTTTT TAGGACGAGT GCGGGAGTTT
TTGCAAGTTC ATTGTCAAGG TGCGATCGCC GCTAGTCCTG TTTCAGCAGA ACAAAAACAG
CACATTTTGG CTGGACAACA CAATTACTGT AGCAAACAGC AACAAAACGA TAAAACTCGC
CGGGTGCTAG AAAAAGCTTT TGGTACAGAT TGGGCAGAAA ATTACATGAC CACAGTGTTG
TTTGACCTCC CAGAATAA
 
Protein sequence
MSLTSIPSLR EQQHPLIRQL ADCIEEVWHQ HLDLSPYHLP AELGYVEGRL EGEKLTIENR 
CYQTPQFRKM HLELAKVGNM LDILHCVMFP RPEYDLPMFG CDLVGGRGQI SAAIADLSPV
HLDRTLPASY NSALTNLDTL NFSQPRELPE WGNIFSDFCI FVRPSSPEEE AMFLGRVREF
LQVHCQGAIA ASPVSAEQKQ HILAGQHNYC SKQQQNDKTR RVLEKAFGTD WAENYMTTVL
FDLPE