| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_3583 |
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| Symbol | |
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| ID | 3679353 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 4461544 |
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| End bp | 4462971 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637718934 |
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| Product | galactoside symporter |
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| Protein accession | YP_324084 |
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| Protein GI | 75909788 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
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| TIGRFAM ID | [TIGR00792] sugar (Glycoside-Pentoside-Hexuronide) transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.012026 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAATA GTCAAAAATT AGATTTGAAA ACCAAGCTGG CTTACGGTGC CGGTGATTTA
GGCCCAGCAA TTACCGCTAA TATTTCTATA TTCTTTCTAT TAATTTTTTT TACCAACGTT
GCTGGTATTC CGGCTGGTTT GGCGGGCAGT GTTTTAATGA TTGGTAAAAT CTGGGACGCT
GTTAACGATC CTTTTGTGGG GGTATTGACG GATAAAACTA AGTCTCGGCG CTGGGGTCGT
CGTTTGCCCT GGATGCTTTA TGGGGCAATT CCCTTTGGAA TTTTCTTTTT CTTACAGTGG
ATTGTACCGC GATTTAGTAG CGACCAGGGT AGTAATGTCT GGGCGTTGTT TTGGTATTAC
GTAGTGATTG GGTTGATTTC CCAGGTGTTT TACACCGTTG TAAATCTGCC TTATACAGCC
CTGACTCCAG AACTTACCCA AGATTATGAC GAACGCACTA GCCTCAATAG TTTTCGCTTC
GCCTTTTCTA TTGGTGGCAG CATTTTATCT TTAATTTTAT CTAAAGTTGT TTTGTCGTTG
ATTAGCGATC GCCAACAACA GTATATAGTT TTAGCGGCAA TTTGCACCGT CATCTCGGTT
ATATCATTAT ATTGGTGCGT GTTTGGGGTG CGCGATCGCG TATTGGCATT TGAAGCAAAA
CGTATTCAAA TTGAGGACTC TGACTCTATT CCCTTTTTTG AGCAATTAAA AATTGTTTTC
AGCAATCGCC CTTTTCTATT TGTGATTGGC ATATATTTGT TTTCTTGGTT AGGAGTACAA
ATCACAGCCA GCATTATTCC CTACTTTGTG ATCAATTGTA TGTCTTTGCC TGAATCAGAT
ATACCCACAA CGATGATTGC AGTGCAAGGG ACTGCTTTAT TGATGTTATT TGTCTGGACA
GCTTTAAGTA AAAAAATTGG GAAAAAACTT GTTTATTTCT TGGGAATGAG TCTGTGGATT
ATTGCAGCTG CTGGACTCTT TTTCTTACAA CCCGGTCAAA TCAGTTTAAT GTATGTCATG
GCTATCATGG CGGGTGTGGG TGTATCCACA GCTTACTTAG TCCCCTGGTC AATGATTCCC
GATGTCATTG AATTGGACGA ACTGCAAACT GGACAACGGC GAGAAGGGAT TTTTTACGGC
TTCATGGTTT TATTGCAGAA ATTTGGTTTA GCGTTCGGCT TATTTCTGGT GGGTAACGCC
TTGCAAGCAT CTGGTTTTAA AGAAGCTGTT GCTGGACAAA CTACTCTACC AATACAACCA
GAATCGGCTC TTTTCGCTAT CCGTATTGCC GTTGGGCCTT TACCCACCAT CTGTTTAATT
TTTGGCTTAG TCTTAACCTA TTTCTACCCC ATTACCCGTG AAATGCACGC GGAAATTCTG
CTAAAACTCC AAGAACGTCA AAAGCAAAGA GAAACACATC CAGAGTGA
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| Protein sequence | MKNSQKLDLK TKLAYGAGDL GPAITANISI FFLLIFFTNV AGIPAGLAGS VLMIGKIWDA
VNDPFVGVLT DKTKSRRWGR RLPWMLYGAI PFGIFFFLQW IVPRFSSDQG SNVWALFWYY
VVIGLISQVF YTVVNLPYTA LTPELTQDYD ERTSLNSFRF AFSIGGSILS LILSKVVLSL
ISDRQQQYIV LAAICTVISV ISLYWCVFGV RDRVLAFEAK RIQIEDSDSI PFFEQLKIVF
SNRPFLFVIG IYLFSWLGVQ ITASIIPYFV INCMSLPESD IPTTMIAVQG TALLMLFVWT
ALSKKIGKKL VYFLGMSLWI IAAAGLFFLQ PGQISLMYVM AIMAGVGVST AYLVPWSMIP
DVIELDELQT GQRREGIFYG FMVLLQKFGL AFGLFLVGNA LQASGFKEAV AGQTTLPIQP
ESALFAIRIA VGPLPTICLI FGLVLTYFYP ITREMHAEIL LKLQERQKQR ETHPE
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