Gene Ava_3579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3579 
Symbol 
ID3679525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4457993 
End bp4458487 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content46% 
IMG OID637718930 
Producthypothetical protein 
Protein accessionYP_324080 
Protein GI75909784 
COG category[S] Function unknown 
COG ID[COG4244] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0095214 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTCGCTC TGCTTCTTAA TAGCCAAAAT CTCCCCTACC CCGACCCCAT ACACCCAATT 
GTTGTGCATT TCGTGATTGC AATGGTGTTT TTCTCATTCT TTTGCGATGT GGTCGGCTAT
TTTACCCGCA ATCCACGTTT GTTTGAGGTC GGTTTTTGGA ATATGTTTGT TGCGGCGATC
GCCATTTTTG TCGCGATCAT TTTTGGGCAG TTTGAAGCAG GCTTGGCACA AGTTTATCCA
GCAGTCCAGT CCACACTTAA CTTTCATACA ATCATGGGTT GGTCACTTGG GGCGATCGTT
GCCGCTATTA CAGCTTGGCG TTGGGTGATT CGCAATCGCC ACCCCCTCAA AGTTCCATCT
GCTTACCTTG GTGTGGCAAC ATTTTTGATT TGTTTAGTGT TCTTGCAAGT GTACTTGGGA
AGCAAGCTGT TTTGGGTATA CGGATTGCAC GTTGAGCCAG TTGTTGAAGC GATGAACCAG
AGGATATCGC CATGA
 
Protein sequence
MFALLLNSQN LPYPDPIHPI VVHFVIAMVF FSFFCDVVGY FTRNPRLFEV GFWNMFVAAI 
AIFVAIIFGQ FEAGLAQVYP AVQSTLNFHT IMGWSLGAIV AAITAWRWVI RNRHPLKVPS
AYLGVATFLI CLVFLQVYLG SKLFWVYGLH VEPVVEAMNQ RISP