Gene Ava_3578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3578 
Symbol 
ID3679524 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4457391 
End bp4457996 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content43% 
IMG OID637718929 
Producthypothetical protein 
Protein accessionYP_324079 
Protein GI75909783 
COG category[S] Function unknown 
COG ID[COG4244] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0100166 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTCCC AACTCATTGA CCAATTAAGA TTGAAATTAG GTGTTAACGG ACTGCCCTAC 
GAAATCCCTA TGCACCCAAT ACTGGTGCAT CTAACATTAG GCTTATTTAT TATTGCCATC
TTGTTTGACA TAGCAGGAGC TATTTTTCCT CTAGAAAGAT CCATCTTTAA ATTCTTGGGA
CTGACTGCTA TTCGTGCCAA CTTCTTTGAT GTTGGTTGGT ACAACCTGCT AGGCGCAGCT
GCTGTGACTT TTTTCACAGT CGCATTTGGT TTTTTCGAGC TACTACTGGC AAACCCACCA
ATTAATCAAA AGAGTGATTG GGGGTTAAAC GCCTCTTGGA CAATGCTTTT GCATGGTTTG
GGTGGTGTTC TTTTGTTGGG GCTGATTGTT GCCATGACTG TGTGGAGAGG TTTACAACGC
TACTACTGGC GCAAAGATGC TTCCAGACAA GTGCAGTGGA ATTACTTGTT AGCAGGTATC
GCAATGCTGG GCATCTTGTT TGTTCACGGA ACTTTAGGAG GGCAAATGGG ATCAGAATTT
GGCATTCATG TTACTGCTGC TAAGTTACTC CCAGAAGGCG CAAACTCAAA CTTACTACCC
AAATAA
 
Protein sequence
MNSQLIDQLR LKLGVNGLPY EIPMHPILVH LTLGLFIIAI LFDIAGAIFP LERSIFKFLG 
LTAIRANFFD VGWYNLLGAA AVTFFTVAFG FFELLLANPP INQKSDWGLN ASWTMLLHGL
GGVLLLGLIV AMTVWRGLQR YYWRKDASRQ VQWNYLLAGI AMLGILFVHG TLGGQMGSEF
GIHVTAAKLL PEGANSNLLP K