Gene Ava_3573 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3573 
Symbol 
ID3679519 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4451259 
End bp4452395 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content42% 
IMG OID637718924 
Productglycosyl transferase, group 1 
Protein accessionYP_324074 
Protein GI75909778 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.823094 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0285529 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATAT TATTTTTAGA CCAGAGTGGT AAACCCGGTG GTGCAGAGTT GTGTTTAATT 
GATATTGCGA AACCTTACAG CGATCGCGCC TTGGTTGGTT TATTTGCGGA TGGAGCATTT
AAAACCTTAC TAGAGCAACA TCATATCCCG GTTGAAGTAT TCACCAATCA GCCAATTCAA
GTCCGCAAGC AAAGTAATTT ATTGCAAGCA TTTAGTAGCT TGGGACAACT TGCGCCTCTG
GTGGCTAAAG TTGTAGAGAA AGCCCGTGAA TATGATGTAA TCTACGCCAA TACGCAAAAA
GCCTTAGTTG TGGGGGCGAT CGCTAGCTTT ATCGCTCGTC GTCCTTTGGT TTATCATTTA
CATGACATTC TCTCCCCAGA ACACTTTAGC CAAACTAACC TGCGGGTTGC AGTTAACTTA
GCTAATCGTT TCGCCTCATT GGTAATCGCC AATTCCCAAG CCAGTCAAAC AGCATTTATC
CAAGCTGGAG GACGCGCAGA GCTAACGACA GTCATCTACA ACGGTTTTGA TATAAATTTA
TATCAAACTG CTGCATCAGA TATTAGTAAA TTACGGCAAT ATTTAGGCAT AGCAAATAAT
TTTGTAGTTG GACATTTCAG CCGTCTTTCA CCTTGGAAGG GACAACATAT TCTAATTGAT
GCACTAGCTC AATGTCCGCC ACAAGTAACG GCAATTTTGG TCGGTGATGC CCTATTTGGT
GAGCAAGAAT ATGTCAAAGA ATTACATCAA CAAATTACCA GATTAGGGCT AGAAAACCGC
GTTAGATTTT TAGGATTCCG GGCGGATATT CCTCAATTAA TGGCGGCTTG TGATTTAGTG
GCTCATACTT CCACAGCCCC AGAACCCTTT GGTAGAGTAA TTGTTGAAGC CATGCTTTGT
GGCAAACCTG TAGTTGCAGC CAAAGCCGGT GGTGCAATGG AATTAGTCGA ACATGGAGTT
AATGGCTTTT TAACCACACC AGGAGAATCC CAAGAACTAG CCGATATTAT TAATACCTGT
TTCCAAGAAA AACACACCAC TGCAACTATT GCTAGTAATG CTAAAGCTAT TGCTAGTCAG
CGTTTTAGTG TCCAAAATAT CAATCAACAG ATTGCCCAAG TCTTACACAC AATTTAA
 
Protein sequence
MKILFLDQSG KPGGAELCLI DIAKPYSDRA LVGLFADGAF KTLLEQHHIP VEVFTNQPIQ 
VRKQSNLLQA FSSLGQLAPL VAKVVEKARE YDVIYANTQK ALVVGAIASF IARRPLVYHL
HDILSPEHFS QTNLRVAVNL ANRFASLVIA NSQASQTAFI QAGGRAELTT VIYNGFDINL
YQTAASDISK LRQYLGIANN FVVGHFSRLS PWKGQHILID ALAQCPPQVT AILVGDALFG
EQEYVKELHQ QITRLGLENR VRFLGFRADI PQLMAACDLV AHTSTAPEPF GRVIVEAMLC
GKPVVAAKAG GAMELVEHGV NGFLTTPGES QELADIINTC FQEKHTTATI ASNAKAIASQ
RFSVQNINQQ IAQVLHTI