Gene Ava_3569 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3569 
Symbol 
ID3679515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4444037 
End bp4445146 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content43% 
IMG OID637718920 
Productglycosyl transferase, group 1 
Protein accessionYP_324070 
Protein GI75909774 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.798632 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00507344 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAAAATAT TACATATTAC CAATCATGTA CAAGAAATTG GTAATGGAAT AGTCAATGTT 
GCAGTAGATT TAGCCTGCTT ACAAGCCAAA GACGGTCATC AAGTGGCTGT AGCGTCTGCT
GGTGGAGGAT ACGAACCATT ACTTGGTAGT TATGGTGTTA GACACTTTCA TTTAGATCAG
TCTAGACAAC CGCTAAATAT GATTCAAGCT ATTTGGCGTT TTCGGCAGAT TATCCAAAAA
TTTCAGCCAG ATATAGTTCA TGCACATATG ATGACGGGAG TTGTACTGGC AGGCATATTA
AAAACAAGTT GTGATTATAG TTTAGTGTCT ACAGTACACA ATGAGTTCCA GCGTAGCGCA
GTACTCATGG GATTAGCAGA TAGAGTCATC GCTGTTAGTC ATGCGGTAGC TACTTCGATG
GTGCGGCGTG GTATTCCCCG CAACAAACTG CGAGTGGTAT CCAATGGCAC ATTAGGAAGC
CCCCGTCATC GTCAAATTCA AGATTACCAA CCATTACCCT TACAGCGTCC TGCAATTACT
ACTGTTGCGG GGATGTATTC CCGTAAAGGA ATTGCTGAGT TAATTGCAGC TTTTAGCAAA
ATTGCCCAGG ACTTTCCTCA AGCACATCTA TATTTGGTAG GGAACGGGCC AGATAAATCA
ATTTTCGAGG CTATGGCCAG AAATACGCCT TTTAATGAAC GGATACATTT TGAAGGTTTC
CAGGCAGAAC CGCAACGGTA TATGCTAGCA ACCGATATTT TTGTCCTCCC TTCCCATTGT
GAATCCTTCG GTTTAGTCCT CACAGAAGCA CGAGAAGCCG GTTGTGCGAT CGTTGCCAGT
GATGTGGATG GTATCCCCGA AACCTTAGAT AATCGTCAAG CTGGGCTATT AGTACCACCA
AAAGATAGTC ACACATTGGC AGAGGCTTTA ACTCAATTGC TCAAAGATCC CATACAACTA
TATAAGTGGC AATGCCGTGC CAAACAAAAT ATAGAAAGAT TTAGTGCTAC TAGAGTCAAC
GAAGAAACAC TAGCGGTCTA CCATGAATTA GTTCCACAAT ACAACTTTAA ACCCATAATG
CAACCACGGG AAGTTTTAGT CAGCAAGTAG
 
Protein sequence
MKILHITNHV QEIGNGIVNV AVDLACLQAK DGHQVAVASA GGGYEPLLGS YGVRHFHLDQ 
SRQPLNMIQA IWRFRQIIQK FQPDIVHAHM MTGVVLAGIL KTSCDYSLVS TVHNEFQRSA
VLMGLADRVI AVSHAVATSM VRRGIPRNKL RVVSNGTLGS PRHRQIQDYQ PLPLQRPAIT
TVAGMYSRKG IAELIAAFSK IAQDFPQAHL YLVGNGPDKS IFEAMARNTP FNERIHFEGF
QAEPQRYMLA TDIFVLPSHC ESFGLVLTEA REAGCAIVAS DVDGIPETLD NRQAGLLVPP
KDSHTLAEAL TQLLKDPIQL YKWQCRAKQN IERFSATRVN EETLAVYHEL VPQYNFKPIM
QPREVLVSK