Gene Ava_3567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3567 
Symbol 
ID3679513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4441642 
End bp4442820 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content45% 
IMG OID637718918 
ProductN-acylglucosamine 2-epimerase 
Protein accessionYP_324068 
Protein GI75909772 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2942] N-acyl-D-glucosamine 2-epimerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0592245 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGAAAA ACTTGCAAGC ATTGGCGCAA CTTTACAAAA ATGCCCTCCT CAACGACGTA 
CTCCCGTTTT GGGAAAACTA CTCCCTCGAT AGTGAAGGCG GTTACTTTAC TTGTCTTGAT
CGCCAAGGTA AGGTGTATGA CACAGATAAA TTTATTTGGT TGCAAAATCG CCAAGTCTGG
ACTTTTTCTA TGCTGTGTAA CCAGCTAGAA AAACGGGAAA ACTGGCTCAA AATTGCGAGG
AACGGCGCTA AATTTCTTGC CCAACATGGT AGAGATGACG AGGGTAACTG GTATTTTGCC
CTCACCCGTG GAGGTGAACC ATTAGTACAG CCTTACAATA TTTTTTCTGA TTGCTTTGCG
GCGATGGCCT TTAGCCAATA TGCTCTCGCC TCTGGTGAAG AGTGGTCAAA AGATGTGGCA
ATGCAAGCAT ATAATAATGT TTTGCGTCGT AAAGATAACC CCAAAGGCAA ATATACCAAA
ACCTATCCCG GCACACGCCC CATGAAAGCT TTAGCTGTGC CGATGATTTT AGCCAACCTC
ACTCTAGAAA TGGAATGGTT GCTTCCCCAG GAGACTCTAG AAAATGTCTT GGCTGCAACC
GTTCAGGAAG TTATGGGTGA CTTTCTCGAC CAAGAACGAG GATTGATGTA TGAAAATGTT
GCCCCCGATG GTTCCCACAT TGATTGTTTT GAAGGTCGGC TGATTAACCC CGGTCACGGT
ATTGAAGCGA TGTGGTTTAT TATGGACATC GCCCGACGGA AAAACGACAG CAAGACTATT
AACCAAGCAG TTGATGTGGT GTTAAATATC CTCAATTTCG CCTGGGATAA CGAGTATGGT
GGCTTGTATT ACTTTATGGA TGCAGCAGGT CATCCTCCAC AACAATTGGA ATGGGATCAA
AAATTGTGGT GGGTGCATTT AGAATCTTTG GTGGCTTTGG CGATGGGTTA TCGTTTGACA
GGTCGTGAAG TCTGTTGGGA ATGGTATCAA AAAATGCACG ATTATTCCTG GCAGCATTTT
GCTGACCCAG AATATGGTGA GTGGTTTGGC TACTTAAATC GCCGTGGGGA AGTGCTGTTA
AATCTCAAAG GTGGTAAATG GAAGGGATGT TTTCATGTAC CCCGTGCTTT GTATCTGTGT
TGGCAACAGT TCGAGGCCTT GAGTTTACAA TCAGCTTAA
 
Protein sequence
MGKNLQALAQ LYKNALLNDV LPFWENYSLD SEGGYFTCLD RQGKVYDTDK FIWLQNRQVW 
TFSMLCNQLE KRENWLKIAR NGAKFLAQHG RDDEGNWYFA LTRGGEPLVQ PYNIFSDCFA
AMAFSQYALA SGEEWSKDVA MQAYNNVLRR KDNPKGKYTK TYPGTRPMKA LAVPMILANL
TLEMEWLLPQ ETLENVLAAT VQEVMGDFLD QERGLMYENV APDGSHIDCF EGRLINPGHG
IEAMWFIMDI ARRKNDSKTI NQAVDVVLNI LNFAWDNEYG GLYYFMDAAG HPPQQLEWDQ
KLWWVHLESL VALAMGYRLT GREVCWEWYQ KMHDYSWQHF ADPEYGEWFG YLNRRGEVLL
NLKGGKWKGC FHVPRALYLC WQQFEALSLQ SA