Gene Ava_3555 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3555 
Symbol 
ID3679579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4424862 
End bp4425833 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content45% 
IMG OID637718906 
Producthypothetical protein 
Protein accessionYP_324056 
Protein GI75909760 
COG category[S] Function unknown 
COG ID[COG2006] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAACC AAAAACCATC TGTCAGCCTG ATCCGGGCTA CTTCCTACGA ACGGGAAGCG 
TTAAAGAACT CTCTTGTCAC CTTGCTAGAA CCTTTTGGGG GGATGGCTGC TTTTGTTAAA
CCAGGACAAC GGGTTTTACT GAAACCTAAT TTACTCACGG GTGCGCGTCC CACTAAAGAA
TGTACCACCC GCGCCGAACT AGTGTATGCT GTTGCCCAAA TGGTAATCGC CGCAGGTGGT
AAGCCCTTTC TGGGGGATAG TCCAGCTTTT GGTAGTGCTA AGGGTGTAGC GATCGCCAAC
GGTTATCAGC CACTTATTCA AGAACTCAAT CTGCCAATCA TCGATTTTCA TGGCAAACGT
TACGAAACTG TTAGTGAAAA CTTTAATCAC TTGCTACTGA GTAAAGAAGT CATAGAAGCA
GATGTGGTGA TTAACTTACC AAAAGTCAAA TCCCATGCTC AATTAACTTT AACTTTGGGC
GTAAAAAACC TCTTTGGTTG TGTTCCCGGC AAAATGAAAG CATGGTGGCA CATGGAAGCT
GGGAAGGATG CTGACCGATT TGGGGAAATG TTGGTAGAAA CTGCCAGGGC AATTAACCCA
GATTTAACTA TTTTAGACGG CATTATCGGT CATGAAGGCA ATGGCCCCAG TGGCGGCGAA
CCTCGTGCCT TGGGTATATT GGCAGCCGCA TCAGATATAT TTGCCCTAGA TAGAGCAATG
GTAGAAATTC TGAACGTTCC ACCCCATCAA GTGCCTACCG TTGCCGCATC CCAAAGGCTA
AGGGTTTGCC CAGAACTTGC TGATGTTGAG TTTCCCAACT TACATCCTGA TTTATTAAAA
ATTTATGATT GGCAACTTCC CGATAAGTTG ATGCCCATTG ATTTTGCTAT GCCCCGTGTT
ATTAAGTCCA CTTTTAAACA CTTCTATATC CGCTTTATCA AAGAACCCAT GAGTGCCTAT
GGTAAACAGT AA
 
Protein sequence
MQNQKPSVSL IRATSYEREA LKNSLVTLLE PFGGMAAFVK PGQRVLLKPN LLTGARPTKE 
CTTRAELVYA VAQMVIAAGG KPFLGDSPAF GSAKGVAIAN GYQPLIQELN LPIIDFHGKR
YETVSENFNH LLLSKEVIEA DVVINLPKVK SHAQLTLTLG VKNLFGCVPG KMKAWWHMEA
GKDADRFGEM LVETARAINP DLTILDGIIG HEGNGPSGGE PRALGILAAA SDIFALDRAM
VEILNVPPHQ VPTVAASQRL RVCPELADVE FPNLHPDLLK IYDWQLPDKL MPIDFAMPRV
IKSTFKHFYI RFIKEPMSAY GKQ