| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_3553 |
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| Symbol | |
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| ID | 3679577 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 4422987 |
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| End bp | 4424069 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637718904 |
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| Product | photosystem II reaction centre protein PsbA/D1 |
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| Protein accession | YP_324054 |
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| Protein GI | 75909758 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01151] photosystem II, DI subunit (also called Q(B)) |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCAA CCTTACAACA GCGCAAAAGC GCCAACGTAT GGGAACAGTT CTGCGAGTGG
ATTACCAGCA CCAACAACCG CCTATACATC GGTTGGTTCG GCGTACTAAT GATCCCCACC
TTGCTAGCTG CAACCACCTG CTTCATCATC GCCTTCATCG CCGCACCTCC AGTAGACATC
GACGGCATCC GTGAACCAGT AGCAGGTTCC TTAATCTACG GAAACAACAT CATCTCAGGT
GCAGTTGTTC CCTCCTCCAA CGCCATCGGT TTGCACTTCT ACCCAATTTG GGAAGCAGCA
TCTCTTGACG AGTGGTTGTA CAACGGTGGT CCTTACCAAT TGGTAATCTT CCACTTCTTG
ACCGGCGTAT TCTGCTACCT CGGTCGTGAA TGGGAACTAT CCTACCGCTT AGGAATGCGT
CCTTGGATCT GCTTAGCATT CTCCGCTCCC GTAGCAGCAG CAACAGCAGT ATTCTTGATC
TACCCAATCG GACAAGGTTC CTTCTCCGAC GGTATGCCCT TGGGTATCTC CGGCACCTTC
AACTTCATGA TCGTGTTCCA AGCAGAACAC AACATCTTGA TGCACCCCTT CCATATGTTA
GGTGTAGCAG GTGTATTCGG TGGTAGCTTG TTCTCCGCAA TGCACGGTTC CTTGGTAACT
TCCTCCTTAG TTCGTGAAAC AACTGAGAAC GAATCACAAA ACTACGGTTA CAAATTCGGT
CAAGAAGAAG AAACCTACAA CATCGTTGCA GCACACGGTT ACTTCGGTCG CTTGATCTTC
CAATACGCTT CCTTCAACAA CAGCCGTCAA TTGCACTTCT TCCTAGCTGC ATGGCCTGTA
ATCGGTATTT GGTTTACCGC GTTGGGTGTA AGCACAATGG CGTTCAACTT GAACGGCTTC
AACTTCAACC AATCCATCAT CGACTCACAA GGTCGTGTAA TCAATACCTG GGCTGACATC
ATCAACCGCG CTAACTTGGG TATGGAAGTA ATGCACGAGC GTAACGCTCA CAACTTCCCC
TTAGACTTGG CTGCTGGTGA AGTTGCTCCT GTTGCTTTAA CCGCTCCTGC TATCAACGGT
TAA
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| Protein sequence | MTATLQQRKS ANVWEQFCEW ITSTNNRLYI GWFGVLMIPT LLAATTCFII AFIAAPPVDI
DGIREPVAGS LIYGNNIISG AVVPSSNAIG LHFYPIWEAA SLDEWLYNGG PYQLVIFHFL
TGVFCYLGRE WELSYRLGMR PWICLAFSAP VAAATAVFLI YPIGQGSFSD GMPLGISGTF
NFMIVFQAEH NILMHPFHML GVAGVFGGSL FSAMHGSLVT SSLVRETTEN ESQNYGYKFG
QEEETYNIVA AHGYFGRLIF QYASFNNSRQ LHFFLAAWPV IGIWFTALGV STMAFNLNGF
NFNQSIIDSQ GRVINTWADI INRANLGMEV MHERNAHNFP LDLAAGEVAP VALTAPAING
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