Gene Ava_3548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3548 
Symbol 
ID3679572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4418373 
End bp4418882 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content41% 
IMG OID637718900 
Productinorganic pyrophosphatase 
Protein accessionYP_324050 
Protein GI75909754 
COG category[C] Energy production and conversion 
COG ID[COG0221] Inorganic pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.38462 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACTTAT CCCGTATTCC AGCACAACCC AAACCAGGAG TCATCAATAT TCTGATTGAA 
ATTGCTGGTG GTAGTCAAAA TAAATACGAA TTTGATAAAG ACTTGGAAGC CTTTGCTCTA
GACCGAGTAT TGTATTCTTC GGTTAAGTAT CCTTATGATT ATGGCTTTGT CCCAAATACC
TTAGCTGATG ATGGCGATCC CCTGGATGGT ATGGTAATTA TTGATGAGCC AACCTTTCCT
GGTTGTGTCA TCGCGGCCAG ACCAATTGGC TTTTTGGAAA TGATTGACGG TGGCGATCGC
GATGAGAAAA TTTTGGCAGT ACCTGACAAA GACCCCCGCT ACGCTCACGT AAAATCTTTG
AATGACGTAG CCCCACATCG CTTGGATGAA ATAGCTGAGT TTTTCCGTAG TTACAAAAAT
TTAGAAAAAA AAGTAACTCA AATCCTCGGT TGGCAAGATG TTGATCAAGT GAAAGCTCTA
GTTGACAAAT CCATTAAAGC TTACAAGTAA
 
Protein sequence
MDLSRIPAQP KPGVINILIE IAGGSQNKYE FDKDLEAFAL DRVLYSSVKY PYDYGFVPNT 
LADDGDPLDG MVIIDEPTFP GCVIAARPIG FLEMIDGGDR DEKILAVPDK DPRYAHVKSL
NDVAPHRLDE IAEFFRSYKN LEKKVTQILG WQDVDQVKAL VDKSIKAYK