Gene Ava_3546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3546 
Symbol 
ID3679570 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4416900 
End bp4417799 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content43% 
IMG OID637718898 
Producthypothetical protein 
Protein accessionYP_324048 
Protein GI75909752 
COG category[R] General function prediction only 
COG ID[COG1235] Metal-dependent hydrolases of the beta-lactamase superfamily I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.285484 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAATC TTGAGCTGTC AGGTTCCCAA AGCTACCTAA ATGATGAGTC TACTGCTAAC 
CTAAGTAGTC TCGCTGGTAA ATTTATCGTG CAGTTCTGGG GGGTTAGGGG ATTAATTCCC
ACCCCAAGCA GTAATACTAG CCGTTATGGG GGTAATACTG CTTGTGTAGA AATGCAGGTG
GCTGGTAAAC GCCTAATTTT TGATGGTGGT ACGGGTTTAC GGATATTGGG TAAAGCTTGG
CAGCACTTAC AACAGCCGCT AGAAGCCCAT TTATTTTTTA CCAATTCTCA ATCAAACCGT
ATCCAAGGGT TTCCCTTCTT TGCTCCTGCA TTTATTGCCG GAAATTGCTT TCACATTTAC
GGTGGGGCTG CATCTAATGG GGCTTCGATT AAACAATCCT TGTGTGATCA AATGCTCCAA
CCACATTTTC CTTATCCGTT ACAGGTAATG CAGTCGGAGT TGCAGTTTTA CCACTTGACT
CCTGATAGTG AATTGAAGTT AGATGATGTC ACTATTAGAA CAGCATTAAT TAATCAAACC
CAGCGTTCAA TTGGCTATCG CGTTACATGG CAAGAATATA GCGTCGCCTA TGTCACGGAT
TTAAATATGA GTGCTGAACA AGGTGAAAGA GAACAAGTTT TGCAAATTAT TCAAGATGTT
GATTTGCTGA TTGCTAACGC TACCTATACG CCGCCAACAT CTCATGAACA TGAGTCGGCT
GAGTTACTCT GGCAAGCGGC TGTAGAAATG GCTCAGAAGG CAGGGGTACG CAAGTTAATT
ATCTCCCACC ATCACCCAGA CGATCATGAT GATTTTCTTG ATCAGGTGGA AAAGGAAGTT
CAGTCTACCT TTTCTAACGC TTCACTAGCT TGTGAAGGTT TGGTTTTACC GGTTTTTTAA
 
Protein sequence
MTNLELSGSQ SYLNDESTAN LSSLAGKFIV QFWGVRGLIP TPSSNTSRYG GNTACVEMQV 
AGKRLIFDGG TGLRILGKAW QHLQQPLEAH LFFTNSQSNR IQGFPFFAPA FIAGNCFHIY
GGAASNGASI KQSLCDQMLQ PHFPYPLQVM QSELQFYHLT PDSELKLDDV TIRTALINQT
QRSIGYRVTW QEYSVAYVTD LNMSAEQGER EQVLQIIQDV DLLIANATYT PPTSHEHESA
ELLWQAAVEM AQKAGVRKLI ISHHHPDDHD DFLDQVEKEV QSTFSNASLA CEGLVLPVF