Gene Ava_3545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3545 
Symbol 
ID3679569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4414729 
End bp4416774 
Gene Length2046 bp 
Protein Length681 aa 
Translation table11 
GC content44% 
IMG OID637718897 
ProductSodium/hydrogen exchanger 
Protein accessionYP_324047 
Protein GI75909751 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0475] Kef-type K+ transport systems, membrane components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATATTAG ATGCGATCGC TATTTCTTGG CAAAGTGTAA TTAATTATTC ATTAGCTTCC 
GTATTATCCA CACCTATTAA AGACCCAGTA CCAGTTTTCT TGATGATTTT GGGGATTATG
TTAGTCGCTC CCCTACTATT TGAGAAGATT CGTCTACCTG GGATTGTGGG ATTAATTCTC
GCAGGGGTAG TAGTCGGCCC TAATGGATTG GGATTATTAG CACGAGATAA TACTATTGTG
CTTTTAGGCA CTGTGGGTTT ACTATTTTTG ATGTTTATGG CTGGGCTGGA AACTAGCCTG
GATGATCTGA AATATAACGC AGATAAGGCA GTCATTTTTG GACTAGCTAC CTTTGCAATC
CCAATGGCTT TGGGAACTGG AGCCATGATG GCAATTGGCT ATACTTTTTT ACCTGCAATT
CTGGTAGCTT CTTGTTTCGC TTCTCATACT TTACTCGCCT TACCCATTGC CAGCAAATTG
GGCATTATGC GTTCTCAAGT TTTGACGACG ACTCTCGGTG GTACGCTCAT TACAAATATT
TTGGCGCTTT TGGTTTTAGC GGTGGTAGTC AGGGCGCATC AAGGGAATTT AACTCTTAGT
TTTTGGTTAT TCCTGATTCC GGCGTTAATT ATTTACACCT TTCTTACTTT GTGGGGTGTG
CCACATATCG GACGCTGGTT TTTTCAAAGG TTTGGACATG ATGAAGGGGC AGAGTTTACA
TTTGTTTTGG CTACCCTGTT TGTAGTTTCT TATGGGGCAG AATTAGTCCA AATTGAGCCA
ATTATTGGGG CTTTTTTGGC AGGAGTGGCA ATTACTCAAC TGATACCCCA ACTTAGCCCG
TTGATGAACC GGATTCAATT TATCGGTAAT ACCCTGTTTG TCCCTTTCTT TCTCATTTCT
GTGGGGATGC TGGTGAATCC TTTGATTTTG GTGCAAGAAC CGCGATCGCT GGTAGTATCT
GCTGTGATGG TGTCTGTGGC TATTGTTGCC AAATTTCTTC CCGCTTGGGG TTCTGGTAAG
TTATTTGGCA TGAACTTTAA CAACATCATG GTGATGTTTG GGTTATCAGT GGCGCAAGCT
GCCTCAACTT TAGCAGCCAT CACAGTGGCT TATAATATCA AGCTCGTAGA CCAATTAACA
GTTAATGGCA CGATCGCCAT GATTTTAGTT ACCTGCATTG CTTCTCCTTG GGTAACAGCG
AAATGGGGTA GAAATCTCAA ACCAGAAGCC GATAGTATCC AAACGCGTCC GGGTGGTAGT
ATAGGCGATC GCGTTTTAGT CCCAGTGGCT AACCCCAACA CCGAAGATAA TCTACTCCAG
TTGGCAATTA TCCTGACTAA ATCTGCCTCT GGTACTTTGT TACCACTCCA TATTTTACTA
GAGGAAAATA ACCCCATTTC CCCAGATGCC AAAGCCAAAC AAAGCCAACT CCTATCCACC
GCAGAAATGA TCGCCCATGC GGCGGTTGTG AATGTTACCC CCATCGGCAG GATTGACGAA
TCCATTGACA AAGGTATTGC CCGTGTAGCC GAAGAAAAGC AAGCGAGTGC GATTATCTGC
GGTTGGAAAG GCTACTCTAC CTATCAAGAA AATCTATTTG GTGGTGTCAT TGATAAAATT
GTTCAGCGTA GTTTTATCCC CGTTTTAGTA TCCCGCTTCC CATTACCAAT TGAACACACA
AATCGAGTAT TTTTAGCTTT TACCACCCAA CAAGCCCAAG CCAGCACCTT TGGACAAAGC
ATTGAATTAG CCAAGGCTTT AGCCACAGAA TTGAAAGCCT CTCTCCAACT TTTACAAGTA
GTAGCACTGC GAGGAGAAGC CATTGAGATA GCTGATACTG GACTACCAGC CGACACACCA
ATTCAGAAAG TAAGAGGTAA CTTTGTCCGC CAAGTTTCTC GGTTACTCAA AACCAACGAT
TTACTACTAC TGAATGGGAC TGTGGAGAAC AAAACTCAAC TATTTGCCCT ATTTGGTAAT
GCACCAGAAG CGATCGCCCG TAATCATCCC AAAGTAGCCA TGATTATCGC CTACTTTCCA
CAGTAG
 
Protein sequence
MILDAIAISW QSVINYSLAS VLSTPIKDPV PVFLMILGIM LVAPLLFEKI RLPGIVGLIL 
AGVVVGPNGL GLLARDNTIV LLGTVGLLFL MFMAGLETSL DDLKYNADKA VIFGLATFAI
PMALGTGAMM AIGYTFLPAI LVASCFASHT LLALPIASKL GIMRSQVLTT TLGGTLITNI
LALLVLAVVV RAHQGNLTLS FWLFLIPALI IYTFLTLWGV PHIGRWFFQR FGHDEGAEFT
FVLATLFVVS YGAELVQIEP IIGAFLAGVA ITQLIPQLSP LMNRIQFIGN TLFVPFFLIS
VGMLVNPLIL VQEPRSLVVS AVMVSVAIVA KFLPAWGSGK LFGMNFNNIM VMFGLSVAQA
ASTLAAITVA YNIKLVDQLT VNGTIAMILV TCIASPWVTA KWGRNLKPEA DSIQTRPGGS
IGDRVLVPVA NPNTEDNLLQ LAIILTKSAS GTLLPLHILL EENNPISPDA KAKQSQLLST
AEMIAHAAVV NVTPIGRIDE SIDKGIARVA EEKQASAIIC GWKGYSTYQE NLFGGVIDKI
VQRSFIPVLV SRFPLPIEHT NRVFLAFTTQ QAQASTFGQS IELAKALATE LKASLQLLQV
VALRGEAIEI ADTGLPADTP IQKVRGNFVR QVSRLLKTND LLLLNGTVEN KTQLFALFGN
APEAIARNHP KVAMIIAYFP Q