Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3545 |
Symbol | |
ID | 3679569 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 4414729 |
End bp | 4416774 |
Gene Length | 2046 bp |
Protein Length | 681 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637718897 |
Product | Sodium/hydrogen exchanger |
Protein accession | YP_324047 |
Protein GI | 75909751 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0475] Kef-type K+ transport systems, membrane components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATATTAG ATGCGATCGC TATTTCTTGG CAAAGTGTAA TTAATTATTC ATTAGCTTCC GTATTATCCA CACCTATTAA AGACCCAGTA CCAGTTTTCT TGATGATTTT GGGGATTATG TTAGTCGCTC CCCTACTATT TGAGAAGATT CGTCTACCTG GGATTGTGGG ATTAATTCTC GCAGGGGTAG TAGTCGGCCC TAATGGATTG GGATTATTAG CACGAGATAA TACTATTGTG CTTTTAGGCA CTGTGGGTTT ACTATTTTTG ATGTTTATGG CTGGGCTGGA AACTAGCCTG GATGATCTGA AATATAACGC AGATAAGGCA GTCATTTTTG GACTAGCTAC CTTTGCAATC CCAATGGCTT TGGGAACTGG AGCCATGATG GCAATTGGCT ATACTTTTTT ACCTGCAATT CTGGTAGCTT CTTGTTTCGC TTCTCATACT TTACTCGCCT TACCCATTGC CAGCAAATTG GGCATTATGC GTTCTCAAGT TTTGACGACG ACTCTCGGTG GTACGCTCAT TACAAATATT TTGGCGCTTT TGGTTTTAGC GGTGGTAGTC AGGGCGCATC AAGGGAATTT AACTCTTAGT TTTTGGTTAT TCCTGATTCC GGCGTTAATT ATTTACACCT TTCTTACTTT GTGGGGTGTG CCACATATCG GACGCTGGTT TTTTCAAAGG TTTGGACATG ATGAAGGGGC AGAGTTTACA TTTGTTTTGG CTACCCTGTT TGTAGTTTCT TATGGGGCAG AATTAGTCCA AATTGAGCCA ATTATTGGGG CTTTTTTGGC AGGAGTGGCA ATTACTCAAC TGATACCCCA ACTTAGCCCG TTGATGAACC GGATTCAATT TATCGGTAAT ACCCTGTTTG TCCCTTTCTT TCTCATTTCT GTGGGGATGC TGGTGAATCC TTTGATTTTG GTGCAAGAAC CGCGATCGCT GGTAGTATCT GCTGTGATGG TGTCTGTGGC TATTGTTGCC AAATTTCTTC CCGCTTGGGG TTCTGGTAAG TTATTTGGCA TGAACTTTAA CAACATCATG GTGATGTTTG GGTTATCAGT GGCGCAAGCT GCCTCAACTT TAGCAGCCAT CACAGTGGCT TATAATATCA AGCTCGTAGA CCAATTAACA GTTAATGGCA CGATCGCCAT GATTTTAGTT ACCTGCATTG CTTCTCCTTG GGTAACAGCG AAATGGGGTA GAAATCTCAA ACCAGAAGCC GATAGTATCC AAACGCGTCC GGGTGGTAGT ATAGGCGATC GCGTTTTAGT CCCAGTGGCT AACCCCAACA CCGAAGATAA TCTACTCCAG TTGGCAATTA TCCTGACTAA ATCTGCCTCT GGTACTTTGT TACCACTCCA TATTTTACTA GAGGAAAATA ACCCCATTTC CCCAGATGCC AAAGCCAAAC AAAGCCAACT CCTATCCACC GCAGAAATGA TCGCCCATGC GGCGGTTGTG AATGTTACCC CCATCGGCAG GATTGACGAA TCCATTGACA AAGGTATTGC CCGTGTAGCC GAAGAAAAGC AAGCGAGTGC GATTATCTGC GGTTGGAAAG GCTACTCTAC CTATCAAGAA AATCTATTTG GTGGTGTCAT TGATAAAATT GTTCAGCGTA GTTTTATCCC CGTTTTAGTA TCCCGCTTCC CATTACCAAT TGAACACACA AATCGAGTAT TTTTAGCTTT TACCACCCAA CAAGCCCAAG CCAGCACCTT TGGACAAAGC ATTGAATTAG CCAAGGCTTT AGCCACAGAA TTGAAAGCCT CTCTCCAACT TTTACAAGTA GTAGCACTGC GAGGAGAAGC CATTGAGATA GCTGATACTG GACTACCAGC CGACACACCA ATTCAGAAAG TAAGAGGTAA CTTTGTCCGC CAAGTTTCTC GGTTACTCAA AACCAACGAT TTACTACTAC TGAATGGGAC TGTGGAGAAC AAAACTCAAC TATTTGCCCT ATTTGGTAAT GCACCAGAAG CGATCGCCCG TAATCATCCC AAAGTAGCCA TGATTATCGC CTACTTTCCA CAGTAG
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Protein sequence | MILDAIAISW QSVINYSLAS VLSTPIKDPV PVFLMILGIM LVAPLLFEKI RLPGIVGLIL AGVVVGPNGL GLLARDNTIV LLGTVGLLFL MFMAGLETSL DDLKYNADKA VIFGLATFAI PMALGTGAMM AIGYTFLPAI LVASCFASHT LLALPIASKL GIMRSQVLTT TLGGTLITNI LALLVLAVVV RAHQGNLTLS FWLFLIPALI IYTFLTLWGV PHIGRWFFQR FGHDEGAEFT FVLATLFVVS YGAELVQIEP IIGAFLAGVA ITQLIPQLSP LMNRIQFIGN TLFVPFFLIS VGMLVNPLIL VQEPRSLVVS AVMVSVAIVA KFLPAWGSGK LFGMNFNNIM VMFGLSVAQA ASTLAAITVA YNIKLVDQLT VNGTIAMILV TCIASPWVTA KWGRNLKPEA DSIQTRPGGS IGDRVLVPVA NPNTEDNLLQ LAIILTKSAS GTLLPLHILL EENNPISPDA KAKQSQLLST AEMIAHAAVV NVTPIGRIDE SIDKGIARVA EEKQASAIIC GWKGYSTYQE NLFGGVIDKI VQRSFIPVLV SRFPLPIEHT NRVFLAFTTQ QAQASTFGQS IELAKALATE LKASLQLLQV VALRGEAIEI ADTGLPADTP IQKVRGNFVR QVSRLLKTND LLLLNGTVEN KTQLFALFGN APEAIARNHP KVAMIIAYFP Q
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