| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_3542 |
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| Symbol | |
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| ID | 3679566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 4410588 |
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| End bp | 4411982 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637718894 |
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| Product | PAS/PAC sensor Signal transduction histidine kinase |
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| Protein accession | YP_324044 |
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| Protein GI | 75909748 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.743078 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCATTG TTAACTGTAA TTCGTTTGCT GGTACATCAA AGGCACAGAG AGTGGATGAA
ACTGTAAAAG CACGACATCA ACAAGATCAA CAACAGCTAA TTAATCGCTT GCAGGCTACT
GAAGCACAAT ATCAAGCTAT ATTAAACGCT ATTCCTGATT TTATCTTTCG CCTCAGCCGT
GATGGTAATT TTTTATCTTT GAACGGAGAA GTTGCAAATC TCCCTTGCCC TGGGGAAGAG
TTCACTGGTA AAAATATCCA AAATGTCTTA CCAACTGATA TTGCCACGAT GATTCAAGGA
ATCATTACTA AAACTTTGGA TACAGGAACT TTGCAGACTT GCGAATATCA GTTACCAACA
CCTCTAGAAA TACGAGATTA TGAGGCACGT TTGGTAGTGA GTGGGACGGA TGAAGTCTTA
GCTATTGTTC GAGATATCAC AGAACGGAAA CAAACAGAAG CCAAGTTACT GCTGACATAT
CAAGAACTCG CAGACCTCAA CACCAATTTA GAACATCAGG TAGAAGAACG CACCGCCGAA
TTACAACAGA AAATGCGGGA ACTAGAAGAA ATTCAACGCA TCAAAAATGT TGTATTGCAT
ACCGTAGCCC ATGATTTACG TACTTCGGTG ATTGGTAATT TGATGGTGTT AGAGAATTTG
GGAATGGGGA GTGGCGAGTG GAACGTAGGA AGTAGGGAAA ATAGGGGAAA CAGCGAACAT
GAACTAGAAG AAAGTACAAT TCCCAATCCC CAATCCCCAG TCCCCAATCC CCAATCCCCA
GTCCCCAGTA CCCAATCCCC AATCCCCAAT CCCCAACCCC TCATTTCCGT GCCACGTTCT
ACTATCGATC GCATGATTCA AGGTAATAAT CGGCAATTGG GAATGCTAGA CTCGTTGCTA
GAAATCCACT CCTGTGAGGA AAAAGAACTA ACCCTGCATC GGGAACTTGT TCCATTTGGC
GGACTACTGG AAAAAATCAT TACAGACTTA CAACCACTGT TAAGAGAAAA TCAGGCAACT
TGCAAGAACT TACTTCCTAA GGACTTACCT TTGGTGATGG TTGATCAAGT CCGGTTTGAG
AAAGTTGTGA TGAGTTTGTT TAGTTATAGT TTGCAACACA ATCCCCCAGG GCTGGAATTT
ACGGTCAAAA CCACAGTAGA AGATGGCATG ATTCGGACTC TGATTCAAGA TAACGGTATC
ACAATGAGTA AGTCAGAGTG CGATCGCCTT TTCGATCTAC AAATCCGTGA TCCCCAAGCC
CCCTGTTCCA CAGCAATTTG CTTAAAAATG TACCTGTGTC AGCAATTTAT TCAAGCACAT
GGCGGAAACA TTGGTGCCAT GAGTAATCCT CGGCAAGGGC TAACCTTCTG GTTTACACTG
CCTTCAAGTG GTTAA
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| Protein sequence | MIIVNCNSFA GTSKAQRVDE TVKARHQQDQ QQLINRLQAT EAQYQAILNA IPDFIFRLSR
DGNFLSLNGE VANLPCPGEE FTGKNIQNVL PTDIATMIQG IITKTLDTGT LQTCEYQLPT
PLEIRDYEAR LVVSGTDEVL AIVRDITERK QTEAKLLLTY QELADLNTNL EHQVEERTAE
LQQKMRELEE IQRIKNVVLH TVAHDLRTSV IGNLMVLENL GMGSGEWNVG SRENRGNSEH
ELEESTIPNP QSPVPNPQSP VPSTQSPIPN PQPLISVPRS TIDRMIQGNN RQLGMLDSLL
EIHSCEEKEL TLHRELVPFG GLLEKIITDL QPLLRENQAT CKNLLPKDLP LVMVDQVRFE
KVVMSLFSYS LQHNPPGLEF TVKTTVEDGM IRTLIQDNGI TMSKSECDRL FDLQIRDPQA
PCSTAICLKM YLCQQFIQAH GGNIGAMSNP RQGLTFWFTL PSSG
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