Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3540 |
Symbol | |
ID | 3679564 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 4407112 |
End bp | 4408500 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637718892 |
Product | hypothetical protein |
Protein accession | YP_324042 |
Protein GI | 75909746 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTTATGT TACAAGAAGT TAGCACCCAT CTCATTATTC CAGAACCCTC AGAAGACCTG ATCGTTAACG AGCCTTGGTC GATAGAATTT TATGCTGATG GCTTGATGGA TGAACTTTTT GCTGATATCG ACGAGATTCT TGATGTGAAC TTGCCGCACC TGACTAACAC AAGAGGTAGA CAAATGCGCC AAGCATCTCC AGTCAGTAGG ATGAATGAAA CTGCCGCCAG TGATTGGTTC CATAGTTCCA GCAACCCTTC CCATCATCAA ACTTTAGAAT ATGAACATTT GCAAACCCTA GATGTGCCGC AAATTGTTTT ACCCAACTCA CTCAATCGAG GCGTACAGAG TGTATCTTCT GTCATTAGTA GACAGGGAGG GAAGGTTGTA GTTGAGTCTC AATCTGTCAA ACAGATGACG AGAATCCGTC AGCAAACTCA ACTAACTTTG GGCAAAATGC TGATTGTGGG GACAACCCTT GGTGTGGCGA TCGCTGGTGT ACTATATATA TTGCAATCGG GTGTGTTAGT TCTACTCACT GCCAAACTCA CCCAGCCAAA TCTTAATGTA CGACAAGCAC AACTACTTCC TCAGCCAGAT GTGCAGGGAG AGTTAGCTAA CTATATGCTA GGAGCGCTGG CAGTTATCGA TAAATCAGAT ATCCAAAATC GGCAACCAGC TACTTCGGAA ATTGGCAGCA GGATGACTTA TAGTCCCACA GCCTCAGCTT TCAACAACAG TCAGCCGCCA CCAGGTAATC TACCATCCCC CCTCATTGCC AATAATACAT CGCCAGCACC TAGCCGTTCT AACGTTGTTG AGCGCATTTA CATTCCTGTT TATCAAGCGC CCTTACCGAT GCGCTACGCA CCACCAGTAA TTCCTGGCTC ACCTTTACCA CCAGTTGCGA ATAATTCGGC TACGGGTCAA CCAAACATAG TGAAAAATAC CTTAACTCAA GTGCAACCAG CAGGCAAACC TGCAAACGTT AATATATTAG CCTCGGCTGT GCGTTCAGAA CTGAAGCCAG TAGCTGTACG TAACGCACCA ATTAACATCC AACCAGCACC TAAATTACTC CCAAACCTGC CTGTCGTTCC ATTCGGTGCG AGTCTACCGA AACAGCCTAA CACTGGTGGG GAAGCAGTAC CTGTGGCATC ACTCACCGTG AATGCTCCTG CACCAGCCCC TATCCATACC CTAGAAGGCT TATTAGAATT GGGAAATAAA TCTGTCGCCT TATTTCAAGT TAATGGTACT AGCCGCCGTG TTAGCATTGG TGAAACTATT GGTGCTAGTG GTTGGACTTT AGTTGATGTC AATAATGGTG AAGCTATAGT CCGGCGTAAT GGTGAGGTGC GATCAATATA TGCTGGGCAG AAACTATAA
|
Protein sequence | MLMLQEVSTH LIIPEPSEDL IVNEPWSIEF YADGLMDELF ADIDEILDVN LPHLTNTRGR QMRQASPVSR MNETAASDWF HSSSNPSHHQ TLEYEHLQTL DVPQIVLPNS LNRGVQSVSS VISRQGGKVV VESQSVKQMT RIRQQTQLTL GKMLIVGTTL GVAIAGVLYI LQSGVLVLLT AKLTQPNLNV RQAQLLPQPD VQGELANYML GALAVIDKSD IQNRQPATSE IGSRMTYSPT ASAFNNSQPP PGNLPSPLIA NNTSPAPSRS NVVERIYIPV YQAPLPMRYA PPVIPGSPLP PVANNSATGQ PNIVKNTLTQ VQPAGKPANV NILASAVRSE LKPVAVRNAP INIQPAPKLL PNLPVVPFGA SLPKQPNTGG EAVPVASLTV NAPAPAPIHT LEGLLELGNK SVALFQVNGT SRRVSIGETI GASGWTLVDV NNGEAIVRRN GEVRSIYAGQ KL
|
| |