Gene Ava_3516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3516 
SymbolargC 
ID3679618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4367045 
End bp4368103 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content47% 
IMG OID637718868 
ProductN-acetyl-gamma-glutamyl-phosphate reductase 
Protein accessionYP_324018 
Protein GI75909722 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0002] Acetylglutamate semialdehyde dehydrogenase 
TIGRFAM ID[TIGR01850] N-acetyl-gamma-glutamyl-phosphate reductase, common form 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.535721 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.522703 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAATT TTGGGCGCGT ACCCGTTGGG ATTGTTGGCG CGTCAGGCTA TGGTGGGGTA 
CAGTTAGTCC GATTACTGAT GGATCATCCA GAAGTTGAAC TAGTTTATTT AGGTGGTGAG
AGTAGTGTAG GTAAATCTTT TGCATCTCTC TACCCCCATT TAGCTCATGC AGTTAAATTA
TCAATTGAAG AAGTAGACCC AGAAGTTATT GCGCGTCGCT GCGAAGTGGT ATTTCTCTCG
ATGCCGAATG GTCTAGCTTG TCAAATTGTG CCAACATTGT TGGAAAAAGG CTGTAAAGTA
CTGGATTTGA GTGCAGACTA TCGATTCCGT AACTTGACAA CTTACACCAC TTGGTATGGT
GTGGAAAGGA GCGATCGCCC GACAGCTGAC ACCGCCGTAT ATGGTTTACC GGAACTGTAC
CGCGATCGCA TCTCTGAAGC CCAGTTAGTC GGTTGTCCCG GTTCCTACCC CACCGCTAGC
CTCTTAGCAT TATCACCACT GTTAAAACAA GGGTTAATCG TTCCGGAAAC CGCTATTGTT
GACGCTAAAT CCGGCACATC TGGCGGCGGG AGGGAAGCCA AAACTTATTT ATTACTAGCG
GAAGCAGATA ATTCTCTTGC CCCTTATAGT GTCGTTCGTC ATCGTCACAC ACCAGAAATC
GAGCAAATTT GTAGCGATTT GGCAGGACAC GAAGTTACAG TCCAATTTAC GCCACATCTG
ATCCCCATAG TGCGTGGAAC CTTAGCAACT GTATACGCTA CCCTCCGCGA CCCCGGTTTA
GTAGGAGATG ATTTAACTAC TATTTATACA GCATTTTACC GTAATTCCCC TTGGATAAAA
GTCTGTGAAA GTGGCATTTA TCCCCAAACC AAATGGGCTG CGGGCAGTAA TCTTTGTTAT
ATCGGTGTAG AAGTTGACCC GCGTACTGGC CGGGTAATTG TCATGTCAGC CATTGACAAC
CTGATTAAAG GCCAAGCGGG TCAAGCAATT CAGTGTCTCA ACATTATGAT GGGTTGGGAT
GAGACATTGG GTTTACCAAA GATGGGGTTT TATCCGTGA
 
Protein sequence
MGNFGRVPVG IVGASGYGGV QLVRLLMDHP EVELVYLGGE SSVGKSFASL YPHLAHAVKL 
SIEEVDPEVI ARRCEVVFLS MPNGLACQIV PTLLEKGCKV LDLSADYRFR NLTTYTTWYG
VERSDRPTAD TAVYGLPELY RDRISEAQLV GCPGSYPTAS LLALSPLLKQ GLIVPETAIV
DAKSGTSGGG REAKTYLLLA EADNSLAPYS VVRHRHTPEI EQICSDLAGH EVTVQFTPHL
IPIVRGTLAT VYATLRDPGL VGDDLTTIYT AFYRNSPWIK VCESGIYPQT KWAAGSNLCY
IGVEVDPRTG RVIVMSAIDN LIKGQAGQAI QCLNIMMGWD ETLGLPKMGF YP