Gene Ava_3513 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3513 
Symbol 
ID3679615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4363675 
End bp4364229 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content34% 
IMG OID637718865 
ProductNUDIX hydrolase 
Protein accessionYP_324015 
Protein GI75909719 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.200164 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAAAT TACAAGAATG GCAAATATTA AACTCCAAAA TGGTTTTAGA TCATCCCTGG 
TGTCAAGTCA GGCAAGATGA AGTTAAATTA CCAAGCGGTA CAATAATAGA TGATTATTTT
GTCAATGTCA GACCAGATAT TGTCCTAGTT TTGCCGATTA CCGATAATAG AGAAGTTATA
TTTGTACGTC AATACAGACA TGGGGTGGGA GATTTCTTTT TAGAACTGCC AGCCGGGAGA
TTTGATCCAA CACAAGAAAG TGCTGAAGAT GCAGGGTTGA GAGAATTGCA AGAAGAAACT
GGTTATATTG CTCAACAATT AATCAAAATT GCCATACTAT ACGATAATCC CAGCAAAGAC
ACTAATCAAA TACATTTATT TCTAGCAGAA AATGTGGTTA AAGTTGGGGA GCAAAATTTA
GATATTACAG AGGAAATAGA AATTATTTTA ATTCCTCTTG AATCAGTCTT AGAAAAAATT
ACTCAAGGTG AAATTTCGGT AGCGGGAACT ATTGCAGCTT TATTTCTAGG GTTGAATTTT
ATTACTGATA AGTAA
 
Protein sequence
MSKLQEWQIL NSKMVLDHPW CQVRQDEVKL PSGTIIDDYF VNVRPDIVLV LPITDNREVI 
FVRQYRHGVG DFFLELPAGR FDPTQESAED AGLRELQEET GYIAQQLIKI AILYDNPSKD
TNQIHLFLAE NVVKVGEQNL DITEEIEIIL IPLESVLEKI TQGEISVAGT IAALFLGLNF
ITDK