Gene Ava_3510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3510 
Symbol 
ID3679612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4360024 
End bp4361283 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content47% 
IMG OID637718862 
Producthypothetical protein 
Protein accessionYP_324012 
Protein GI75909716 
COG category[S] Function unknown 
COG ID[COG3597] Uncharacterized protein/domain associated with GTPases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.376537 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAGGC GAGGCGATAA TTCTTGGGCA AATCGTGTGA CTGGTGTCTG GAAAAAGGCA 
GCAGATAGTG TGGTGCAGCG ATTACCAGTG GAACAGGTTT CTCAGAAGTT TGTCCAGTGG
TTTAGTGTGA GTGAAGCCGA AGTTGCCGAG ATTTTGGAAA AGGTACGCCA AGAACTGCCA
ACTACAGAGG CTGTGCTAAT TGGCAAGCCA CAAGCAGGTA AAAGTTCCAT TGTGCGGGGT
CTAACAGGCG TTTCTGCGGA GATTGTCGGA CAAGGCTTTT GTCCCCACAC CCAACACACC
CAACGCTACG CCTATCCATC TAACGACTTG CCTTTACTAG TTTTTACTGA TACCGTAGGG
CTAGGCGATA TCAACCAGGA AACTCAGGCA GTAATTCAAG AGTTGATAGG AGACTTACAA
GAAAAAAGTA GCCGCGCCAG AGTCTTGATT TTGACAGTGA AAATCAATGA TTTCGCTACT
GATACCTTGC GACAAATTGC CCAAGAATTG CGGCGCAAAT ATCCAGAAAT TCCCTGTTTA
CTCGCAGTTA CTTGTTTACA TGAAGTTTAC CCCCCTGGTG TTGAGGATCA TCCAGATTAT
CCACCAAACT ATGAGGAAAT AAACAGGGCT TTTGCGGCGA TTCAAGCAGC TTTTACAGGA
CTTTATGACC GTTCACTCCT CATCGACTTT ACCCTAGAAG AAGATGGCTA CAATCCTGTA
TTTTACGGCT TAGATGCCCT CAGAGATAAT TTGGCAGAAC TCCTCCCAGA AGCGGAAGCC
CAAGCTATTT ACCAGTTATT AGATAAGCCA ACAAGCGAGA AACTGGGCAA TATTTACCGG
GATGCAGGCA GACGTTACAC CTTATCATTT GCGGTGATGG CTGCTGCACT CGCAGCCGTA
CCCTTACCCT TTGCCACGAT GCCAGTACTC ACTGCATTGC AAGTATCGAT GGTGACGCTT
TTAGGTAAAT TATATGGTCA AACACTCACA CCATCCCAAG CAGGTGGTAT TGTGAGTGCG
ATCGCCGGTG GTTTTTTAGC CCAAGCCATA GGAAGAGAGT TAGTTAAGTT TATCCCAGGA
TTTGGGAGTG CGATCGCCGC ATCTTGGGCA GCCGCTTACA CCTGGTCTTT AGGGGAGACA
GCCTGCGTCT ACTTTGGCGA TTTAATGGGT GGTAATAAAC CAGACCCGCA AAAAATCCAA
TCTGTCATGC AGGAAGCTTT TGCCAAAGCG AAAGAACAAT TTAAAGGAAT TAAATCCTGA
 
Protein sequence
MTRRGDNSWA NRVTGVWKKA ADSVVQRLPV EQVSQKFVQW FSVSEAEVAE ILEKVRQELP 
TTEAVLIGKP QAGKSSIVRG LTGVSAEIVG QGFCPHTQHT QRYAYPSNDL PLLVFTDTVG
LGDINQETQA VIQELIGDLQ EKSSRARVLI LTVKINDFAT DTLRQIAQEL RRKYPEIPCL
LAVTCLHEVY PPGVEDHPDY PPNYEEINRA FAAIQAAFTG LYDRSLLIDF TLEEDGYNPV
FYGLDALRDN LAELLPEAEA QAIYQLLDKP TSEKLGNIYR DAGRRYTLSF AVMAAALAAV
PLPFATMPVL TALQVSMVTL LGKLYGQTLT PSQAGGIVSA IAGGFLAQAI GRELVKFIPG
FGSAIAASWA AAYTWSLGET ACVYFGDLMG GNKPDPQKIQ SVMQEAFAKA KEQFKGIKS