Gene Ava_3503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3503 
Symbol 
ID3679776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4345985 
End bp4347031 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content39% 
IMG OID637718855 
ProductAAA ATPase, central region 
Protein accessionYP_324005 
Protein GI75909709 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0464] ATPases of the AAA+ class 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.238924 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCGCG GTGAAATTCT CAGAAAACTC TTTAAAAGCT TCTCTCGCAA CGAGAGAGAA 
GAGTTTTTGG CTGCGGCTCA AGAACTGATT GAAGAAGAAA GAAATAAAAA TCACATCCTG
CTGGCTAGAG ATTTGGAAAA ACTGCTTCAA AATGGCAATG GCTACACTAA ACCCCTAGCA
TCTAACCTAG CTCCCTGGCA TCAGTTTCCT GAACCACCTA AAGATAAAGA CACTGGACTA
GCTTTACTGG ATGTCAAGCG ATTTGACCTG ACATGGGATA ATATCGTCCT CAGTGAAAAA
ATTTTTGATA TCCTGCAAGA AATTGTTCTG GAAAACCGTA AGCAAGACAT CCTTGCAGCT
TATAACCTCA AACCCAAAAA CAAACTACTC TTTTGTGGGC CACCAGGTTG TGGCAAAACC
CAAACCGCAA AAGTTCTTTC TAGTGTCTTG AGTTTACCCC TTGTTTATGT CAACCTGACA
GCAGTATTTT CTTCTTACTT AGGTGAAACA GCAACCAATC TTCAGAAAAT TTTTACATAC
ATAGAAAAAG GCGAATGGCT GGTTTTATTC GATGAGTTTG ATGCGATCGC TCGTGATCGA
GATAACTTAA ATGAACATGG TGAAGTCAAA CGTCTAGTCA ATAGCTTGTT ACAACTCATT
GATAATGCAA CTAATCAAAG TATATTTGTT GCTGCTACTA ATCACGAAAA ACTATTAGAC
AGTGCAGTTT GGCGACGATT TGATGAGGTG ATTTTCTTTG ACAACCCAAC ACTAGAATTA
CGCACGGCTC TTTTAAGCCG TTATCTGTCT GGTATCCGTT ATACTGCTAT TAATCTATCT
ACTTTTGCAG AACGGCTAGA AAATGCTACT GGAGCAGATA TAGAACGTAT TTGTTCTGAT
GCAATTAAAG CCGTAATTCT ACGTGGGGAG CGTACCTTGA GAGCTGATGA TTTAGAAGTT
GCGATAGGAC GTTTTTTAGA AAGGCAAAGT ATAATATCAA ACTCAAAATT ATCATCTAAG
TCAAATCCTA ATGGTAAGTC AGTTTGA
 
Protein sequence
MARGEILRKL FKSFSRNERE EFLAAAQELI EEERNKNHIL LARDLEKLLQ NGNGYTKPLA 
SNLAPWHQFP EPPKDKDTGL ALLDVKRFDL TWDNIVLSEK IFDILQEIVL ENRKQDILAA
YNLKPKNKLL FCGPPGCGKT QTAKVLSSVL SLPLVYVNLT AVFSSYLGET ATNLQKIFTY
IEKGEWLVLF DEFDAIARDR DNLNEHGEVK RLVNSLLQLI DNATNQSIFV AATNHEKLLD
SAVWRRFDEV IFFDNPTLEL RTALLSRYLS GIRYTAINLS TFAERLENAT GADIERICSD
AIKAVILRGE RTLRADDLEV AIGRFLERQS IISNSKLSSK SNPNGKSV