Gene Ava_3501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3501 
Symbol 
ID3679774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4341615 
End bp4342112 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content40% 
IMG OID637718853 
Producthypothetical protein 
Protein accessionYP_324003 
Protein GI75909707 
COG category[R] General function prediction only 
COG ID[COG2405] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.13375 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTATAG TTAGCGATAC ATCACCAATC ACAAACTTAG CCGCGATTGG TCAGTTAGAT 
TTATTGCGAC AGCTGTATGG TAGCGTTATC ATCCCTGAAG CTGTATATAA CGAGATGGCT
AGTGTCAATA AGATTGTCCC TGGTGCAGTA GAGGTACAAA CTTTATCTTG GATTCAGACA
CAGACAGTTA TGAATTCTCT ACAAGTCACA GAAATTCAAG AGAATAACGA AAGTATTCAC
TTGGGAGAAG CCGAAGCAAT TATTTTGTCC TTAGAAATGA AAGCTGACCT GCTCTTAATG
GATGAACGCA GAGGACGAAT AGTAGCTACC AATTATGGAA TTAATGTAAC AGGTCTGTTG
GGAGTCTTGC TACAAGCCAA AAAACAGGGG CTAATTCCAG TTATTAAACC ATTGATTGAT
CAGTTAATTA CCCAGGCAGA CTTTAGAGTT AGTCCTCAGT TGTATACCGT CGTCTTGCAA
GCATCTAACG AGGTTTAA
 
Protein sequence
MIIVSDTSPI TNLAAIGQLD LLRQLYGSVI IPEAVYNEMA SVNKIVPGAV EVQTLSWIQT 
QTVMNSLQVT EIQENNESIH LGEAEAIILS LEMKADLLLM DERRGRIVAT NYGINVTGLL
GVLLQAKKQG LIPVIKPLID QLITQADFRV SPQLYTVVLQ ASNEV