Gene Ava_3493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3493 
Symbol 
ID3679766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4333288 
End bp4333920 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content39% 
IMG OID637718845 
Productfruiting body developmental protein S-like protein 
Protein accessionYP_323995 
Protein GI75909699 
COG category 
COG ID 
TIGRFAM ID[TIGR02586] CRISPR-associated protein DevS
[TIGR02593] CRISPR-associated protein Cas5, N-terminal domain 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0201089 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0546603 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACAA TTGCCTTAAA AGTAGAAGTT CCCATAGCTT GTTTTCGGCA GTCTCGTGCT 
AGGGAATATG GCGAAACTTA CCCTGTACCA CCACCATCGA CAGTATATGG AATGTTACTA
TCTCTTGTTG GAGAAGTGGA TAGATACAAA CACTGCGGTG TGAAGCTGGC GATCGCACTT
CTATCTGAAC CAGAAAAGTC AACTGTTATT CGCACCTTTC ACCGATTTAA GACGAAGAAT
ATCCATGACT CTAAAAATAA TAAACCTGAT TATCAGGAGT TATTAACTAA TATAGAATTT
ATAGTTTGGG TGGATGCTGG AGTAGATAAA GCTAAACCAA ATTTAGTGGA ACGTTTAGCA
GAGGCATTGA CTAACCCGGC TTCTATTAAT AGGTTTGGTG GATTATGTTT AGGTGAAAGT
CGGGATTTAG TGAATGATGT TACCCTTTTA CCTAAAAATT ACTATGCAGA ATCAATGCGA
TGGTTAATTC GAGATGAATA TGGGTTACTA ACTTTACCTT ACTGGGTAGA CCATGTAGGT
TCGCGGGGAA CGCGATGGCT ACGTTACGAG ATTCAGAAAT GTCCAGTCTT TCAACCACCT
GAATTATCTT GGACTTCAGT TCAAAGTAAT TAG
 
Protein sequence
MTTIALKVEV PIACFRQSRA REYGETYPVP PPSTVYGMLL SLVGEVDRYK HCGVKLAIAL 
LSEPEKSTVI RTFHRFKTKN IHDSKNNKPD YQELLTNIEF IVWVDAGVDK AKPNLVERLA
EALTNPASIN RFGGLCLGES RDLVNDVTLL PKNYYAESMR WLIRDEYGLL TLPYWVDHVG
SRGTRWLRYE IQKCPVFQPP ELSWTSVQSN