| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_3474 |
|---|
| Symbol | |
|---|
| ID | 3679786 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 4307191 |
|---|
| End bp | 4308744 |
|---|
| Gene Length | 1554 bp |
|---|
| Protein Length | 517 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637718826 |
|---|
| Product | uroporphyrinogen-III synthase / uroporphyrinogen-III C-methyltransferase |
|---|
| Protein accession | YP_323976 |
|---|
| Protein GI | 75909680 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0007] Uroporphyrinogen-III methylase
[COG1587] Uroporphyrinogen-III synthase |
|---|
| TIGRFAM ID | [TIGR01469] uroporphyrin-III C-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.027722 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.984084 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTCAAC AAAATGGCAA AGTCTACCTT GTGGGTGCGG GGCCGGGAGA TGTGGCATAC
CTCACAGTGA AAGCTTATAA TCTACTGGCT ACGGCTCAAG TGTTGGTTTA TGATGCCCTA
GTTGATGAGC AATTGTTGCA GTGTGTATCA CCCGATTGTC TTAAACTAGA TGTAGGTAAG
CGTGGCGGTA AACCCAGCAC ACCACAAGCC GATATCAATC ATTTACTAGT CAAATACTGC
CAAGAAGGTG CATTAGTCGT TAGGTTGAAA TCAGGCGACC CGTTTATTTT TGGACGCTGT
ACCTCTGAAA TTGAGGCTTT GAAAGCAGCA GGCTGTAAAT TTGAGGTAGT ACCAGGAATT
TCCTCATCCA TAGCCGCGCC TTTATTAGCA GGAATCCCTC TCACTGACCC GGTGATGAGT
CGTTGCTTTG CAGTGTTGAC AGCCCACGAA CCAGAAGTTT TAGACTGGGA GGCGCTGTCA
AGGTTAGACA CCCTGGTCAT ACTAATGGGT GGGAAAAACT TAGCAGATAT AATTAATGAA
CTTTTAAGAA GAGGCCAATC GCATCTCACA CCCATAGCTA TTATTCGCTG GGCAGGAACC
CCCAGTCAAC AAATCTGGAC TGGTCAACTG GGCGATATCC TTGAACAAAC AAGGGGTTTA
TCTCTTTCCC CAGCAGTCAT CGTCATTGGT GAAGTTGTCG GACTACGCAA GTACCTACAA
CCTGAGAAAA TATTTCCAGA GAACTCAACT ACACCTATGT CCAGCAACCA ACCTCTCACT
GGAAAAACCA TCCTCGTCAC CCGTTCATCT GGTCAATCGA GTCAATTTAG CGATCGCCTA
ACTACACTTG GCGCTACAGT AATAGAAATG CCAGCATTAG AAATAGGCTC CCCTTCTAGT
TGGGAGGAAT TAGATCAGGC GATCGCTAAT TTATCTCAAT TCGAGTGGTT AATTCTCACT
TCTACCAACG GTGTAGATTA TTTCTTTGAA AGACTCAACC TCCAAGGTAA AGATACTCGT
GCTTTAGCTG GGGTAAAAAT TGCCGTTGTT GGGGAAAAAA CCTCCCAAAG CCTCAAACAA
AGAGGAATCC AAGCAGATTT TATCCCCCCT AACTTTGTAG CTGATTCTTT AGTAGAGCAT
TTCCCTGAAT CACTACTAAA TAAAAAGATT TTATTTCCCA GAGTTGAAAG CGGTGGTAGA
GAAATTTTAG TCAAAGAACT ATCAGCAAAA GGCGCAGAAG TAATTGAAGT AGCTGCTTAT
CAATCTTGTT GTCCTAGTAG TATTCCCCCA GCAGCAGAAC TAGCCTTAAA AAATCACACA
ATAGATATCA TCACCTTTGC CAGTTCTAAA ACTGTGCAAT TTTTCCATCA ACTTGTAGAC
AACATATTTC CTCACAATAT CCCCAACACT TTAGCAGGAA TATGTATTGC TTCCATCGGC
CCCCAAACCT CGAAAACTTG TCATACCCTA TTAGGTCGAG TAGATGTAGA AGCTGAAGAA
TATACTTTAG ATGGATTAAC CCAATCCATC ATAAATTGGG CATTAAAAGT TTAA
|
|---|
| Protein sequence | MTQQNGKVYL VGAGPGDVAY LTVKAYNLLA TAQVLVYDAL VDEQLLQCVS PDCLKLDVGK
RGGKPSTPQA DINHLLVKYC QEGALVVRLK SGDPFIFGRC TSEIEALKAA GCKFEVVPGI
SSSIAAPLLA GIPLTDPVMS RCFAVLTAHE PEVLDWEALS RLDTLVILMG GKNLADIINE
LLRRGQSHLT PIAIIRWAGT PSQQIWTGQL GDILEQTRGL SLSPAVIVIG EVVGLRKYLQ
PEKIFPENST TPMSSNQPLT GKTILVTRSS GQSSQFSDRL TTLGATVIEM PALEIGSPSS
WEELDQAIAN LSQFEWLILT STNGVDYFFE RLNLQGKDTR ALAGVKIAVV GEKTSQSLKQ
RGIQADFIPP NFVADSLVEH FPESLLNKKI LFPRVESGGR EILVKELSAK GAEVIEVAAY
QSCCPSSIPP AAELALKNHT IDIITFASSK TVQFFHQLVD NIFPHNIPNT LAGICIASIG
PQTSKTCHTL LGRVDVEAEE YTLDGLTQSI INWALKV
|
|---|
| |