Gene Ava_3469 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3469 
Symbol 
ID3679781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4302589 
End bp4303578 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content43% 
IMG OID637718821 
ProductDNA polymerase III subunit delta 
Protein accessionYP_323971 
Protein GI75909675 
COG category[L] Replication, recombination and repair 
COG ID[COG1466] DNA polymerase III, delta subunit 
TIGRFAM ID[TIGR01128] DNA polymerase III, delta subunit 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.206269 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAATTT ATGTTTACTG GGGTGAGGAT GACTTTGCGA TCGCCAAAGC AGTGACAACT 
TTACGCGATC GCGTCCTTGA TCCTCTGTGG ACTAGTTTTA ATTACACTAG TTTTCCCCCA
GAAGACAGCG AAGCACCTAT CCAGGCGTTA AACCAAGTTA TGACACCGGT TTTTGGCGCT
GGGGGAAGGT TAGTGTGGCT GATGAATACT AACCTCTTAC AAAATTGTCC TGAGAATGTA
TTGGCGGAAC TGACGCGCAC TTTATCAGTA ATTCCCGAAA ATTCTTTTTT ATTGCTTACC
TGTCGTAATA AACCAGATGA ACGCTTAAAA TCCACAAAAT TACTGAAGCA ATCCGCCACT
GAATTTCGAG AATTTCCCCT CATTCCACCG TGGAAGACGG AGTTACTGAT CCAAGCTGTG
AATCAAGCTG CTCAAACTGT AGGAGTAAAA CTTACACCAA AATCAGCCGA ACTTTTAGCA
GAAGCTGTAG GTAATGATAC ACGGCTGCTT TACAATGAGA TGGAGAAATT ACGCCTGTAC
GCTGAGGATA ACAATCGGCC TATTGAAGAA AATACTGTTA CTCGGTTAGT CAGAAATACA
ACCCAAAATA GCTTACAACT AGCCGCAGCA ATTAGAGTGG GCGACACAGC TAAAGCTTTG
ACTATTTTGG CTGATCTCAT CAATGCTGCT GAACCAGAAT TGCGGATAAT AGCCACCTTA
ATTGGTCAAT TTCGCACTTG GTTATGGGTG AAACTGATGG TAGAAAGTGG AGAACGCAAT
CCCCAGGCGA TCGCCCAAGC TGCTGAAATC GGTAACCCTA AACGTATCTA CTTTCTCCAG
CAAGAAGTCC AATCACTTTC TCTCAGGCAA TTAATTTCTT GTCTACCATT ATTACTAGAG
TTGGAGGTTA CTGTTAAACA AGGCCGGGCT GAGATATCAA TACTTCAAAT TAAAATCATA
GAACTCTGTC AACTATGCCA ACGCATCTAA
 
Protein sequence
MPIYVYWGED DFAIAKAVTT LRDRVLDPLW TSFNYTSFPP EDSEAPIQAL NQVMTPVFGA 
GGRLVWLMNT NLLQNCPENV LAELTRTLSV IPENSFLLLT CRNKPDERLK STKLLKQSAT
EFREFPLIPP WKTELLIQAV NQAAQTVGVK LTPKSAELLA EAVGNDTRLL YNEMEKLRLY
AEDNNRPIEE NTVTRLVRNT TQNSLQLAAA IRVGDTAKAL TILADLINAA EPELRIIATL
IGQFRTWLWV KLMVESGERN PQAIAQAAEI GNPKRIYFLQ QEVQSLSLRQ LISCLPLLLE
LEVTVKQGRA EISILQIKII ELCQLCQRI